DisGeNET - a database of gene-disease associations

List of shared variants

Prostate carcinoma, C0600139

Disease: Stomach Carcinoma

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs1042522	TP53	0.426	0.800	17	7676154	missense variant	G/C;T	snv	0.67		242
rs1870134	XPC ; LSM3	0.827	0.120	3	14178523	missense variant	G/C;T	snv	4.2E-02; 8.1E-06		5
rs2295080	MTOR	0.695	0.320	1	11262571	upstream gene variant	G/C;T	snv			20
rs11536889	TLR4	0.658	0.560	9	117715853	3 prime UTR variant	G/C	snv		0.11	27
rs1380576	MDM4	0.763	0.240	1	204519150	intron variant	G/C	snv		0.57	10
rs17655	BIVM-ERCC5 ; ERCC5	0.597	0.560	13	102875652	missense variant	G/C	snv	0.28	0.30	52
rs1800796	IL6-AS1 ; STEAP1B ; IL6	0.555	0.760	7	22726627	non coding transcript exon variant	G/C	snv		9.9E-02	74
rs4143815	CD274	0.689	0.400	9	5468257	3 prime UTR variant	G/C	snv		0.23	20
rs1057941	GBAP1	0.701	0.280	1	155216951	non coding transcript exon variant	G/A;T	snv	0.46		18
rs12255372	TCF7L2	0.667	0.480	10	113049143	intron variant	G/A;T	snv			28
rs7758229	SLC22A3	0.732	0.120	6	160419220	intron variant	G/A;T	snv			16
rs1569686	DNMT3B	0.752	0.400	20	32779273	intron variant	G/A;C;T	snv			15
rs2854746	IGFBP3	0.752	0.200	7	45921046	missense variant	G/A;C;T	snv	0.38		14
rs689470	PTGS2	0.776	0.240	1	186671926	3 prime UTR variant	G/A;C;T	snv			9
rs7813	GEMIN4	0.689	0.360	17	744946	missense variant	G/A;C	snv	0.63		22
rs1047840	EXO1	0.708	0.280	1	241878999	missense variant	G/A	snv	0.36	0.40	19
rs1050450	GPX1	0.623	0.600	3	49357401	missense variant	G/A	snv	0.28	0.30	43
rs1143627	IL1B	0.605	0.760	2	112836810	5 prime UTR variant	G/A	snv		0.56	47
rs125701	OGG1	0.790	0.160	3	9748794	upstream gene variant	G/A	snv		0.13	7
rs1529916	USP7	0.851	0.120	16	8897333	intron variant	G/A	snv		0.26	4
rs1799782	XRCC1	0.474	0.800	19	43553422	missense variant	G/A	snv	9.5E-02	7.0E-02	151
rs1799864	CCR2	0.572	0.680	3	46357717	missense variant	G/A	snv	0.13	0.12	68
rs1800566	NQO1	0.576	0.680	16	69711242	missense variant	G/A	snv	0.25	0.21	59
rs1800629	TNF	0.472	0.920	6	31575254	upstream gene variant	G/A	snv	0.12	0.14	169
rs1801133	MTHFR	0.472	0.880	1	11796321	missense variant	G/A	snv	0.31	0.27	174