Disease: Autoimmune thyroiditis
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs113488022
BRAF
0.351 0.840 7 140753336 missense variant A/C;G;T snv 4.0E-06 490
rs121913377
BRAF
0.354 0.840 7 140753335 missense variant CA/AT;TT mnv 480
rs4986790
TLR4
0.438 0.800 9 117713024 missense variant A/G;T snv 6.1E-02; 4.0E-06 223
rs4986791
TLR4
0.456 0.840 9 117713324 missense variant C/T snv 5.7E-02 4.9E-02 182
rs2476601
AP4B1-AS1 ; PTPN22
0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93 121
rs231775
CTLA4
0.504 0.720 2 203867991 missense variant A/G;T snv 0.42; 4.0E-06 115
rs2234767
FAS ; ACTA2
0.649 0.280 10 88989499 intron variant G/A;T snv 0.15 30
rs11568820
VDR
0.672 0.480 12 47908762 intron variant C/T snv 0.38 27
rs72928038
BACH2
0.695 0.360 6 90267049 intron variant G/A snv 0.11 19
rs4409785 0.752 0.240 11 95578258 intron variant T/C snv 0.13 12
rs121434257
AIRE
0.827 0.080 21 44289686 missense variant G/A;T snv 4.0E-05 6
rs1534422
MIR3681HG
0.827 0.160 2 12500615 intron variant G/A snv 0.52 6
rs2270450
LOC101926934 ; SLC25A27
0.827 0.200 6 46677138 3 prime UTR variant C/T snv 0.29 5
rs706779
IL2RA
0.827 0.160 10 6056861 intron variant T/C snv 0.48 5
rs13093110
LPP
0.882 0.120 3 188407332 intron variant C/T snv 0.42 4
rs17759659
BCL2
0.851 0.120 18 63291411 intron variant A/G snv 0.31 4
rs11571297 0.882 0.120 2 203880280 regulatory region variant T/C snv 0.44 3
rs57348955 0.882 0.120 16 31174561 upstream gene variant G/A;C snv 3
rs7537605
VAV3
0.882 0.120 1 107800465 intron variant G/A;T snv 3
rs1133076
TG
0.925 0.080 8 133113438 missense variant G/A snv 0.48 0.56 2