Disease: Malignant neoplasm of urinary bladder
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs2228526
ERCC6
0.752 0.200 10 49470671 missense variant T/C snv 0.22 0.19 13
rs3757441
EZH2
0.752 0.200 7 148827660 intron variant C/T snv 0.80 12
rs351855
FGFR4
0.597 0.560 5 177093242 missense variant G/A snv 0.33 0.26 58
rs1050450
GPX1
0.623 0.600 3 49357401 missense variant G/A snv 0.28 0.30 43
rs1695
GSTP1
0.457 0.880 11 67585218 missense variant A/G snv 0.34 0.36 188
rs11614913
HOXC6 ; MIR196A2
0.512 0.760 12 53991815 mature miRNA variant C/T snv 0.39 0.34 111
rs104894230
HRAS ; LRRC56
0.564 0.600 11 534288 missense variant C/A;G;T snv 73
rs8034191
HYKK
0.695 0.440 15 78513681 intron variant T/C snv 0.27 24
rs2275913
IL17A
0.514 0.760 6 52186235 upstream gene variant G/A snv 0.28 105
rs861539
KLC1 ; XRCC3
0.519 0.680 14 103699416 missense variant G/A snv 0.29 0.30 104
rs13181
KLC3 ; ERCC2
0.487 0.760 19 45351661 stop gained T/A;G snv 4.0E-06; 0.32 134
rs104894360
KRAS
0.724 0.560 12 25209904 missense variant T/A;C snv 14
rs121913530
KRAS
0.583 0.640 12 25245351 missense variant C/A;G;T snv 63
rs1326656542
LIG4
0.776 0.280 13 108210293 missense variant A/T snv 4.0E-06 10
rs12683422
LINGO2
0.742 0.240 9 27969442 intron variant C/T snv 5.7E-02 11
rs10511729
LOC101929563
0.742 0.240 9 23557229 intron variant T/G snv 0.35 11
rs710886
LOC105375751 ; PCAT1
0.763 0.160 8 127014615 intron variant C/T snv 0.37 9
rs2031920
LOC107984284 ; CYP2E1
0.695 0.240 10 133526341 non coding transcript exon variant C/T snv 3.1E-02 20
rs104894229
LRRC56 ; HRAS
0.564 0.600 11 534289 missense variant C/A;G;T snv 73
rs12917
MGMT ; LOC105378560
0.605 0.480 10 129708019 missense variant C/T snv 0.14 0.14 45
rs2910164
MIR3142HG ; MIR146A
0.447 0.880 5 160485411 mature miRNA variant C/G snv 0.71; 4.1E-06 0.70 193
rs3746444
MIR499A ; MIR499B ; MYH7B ; LOC107985393
0.514 0.760 20 34990448 mature miRNA variant A/G snv 0.20 0.19 105
rs34009635
MMP8
0.716 0.360 11 102713445 missense variant A/G snv 2.5E-03 6.2E-04 17
rs35866072
MMP8
0.716 0.360 11 102713373 missense variant T/G snv 6.0E-02 9.8E-02 17
rs17576
MMP9
0.557 0.760 20 46011586 missense variant A/G snv 0.39 0.36 73