DisGeNET - a database of gene-disease associations

List of shared variants

Major Depressive Disorder, C1269683

Disease: Alzheimer's Disease

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs1799724	LTA ; TNF	0.600	0.680	6	31574705	upstream gene variant	C/T	snv		8.5E-02	47
rs1800866	SIGMAR1	0.851	0.080	9	34637693	missense variant	T/G	snv	0.20	0.18	8
rs1360780	FKBP5 ; LOC112267956	0.708	0.320	6	35639794	intron variant	T/A;C	snv			31
rs1065852	NDUFA6-DT ; LOC112268294 ; CYP2D6	0.695	0.360	22	42130692	missense variant	G/A	snv	0.21	0.19	19
rs2075650	TOMM40	0.662	0.360	19	44892362	intron variant	A/G	snv	0.13	0.13	45
rs242941	MAPT-AS1 ; CRHR1 ; LINC02210-CRHR1	0.790	0.200	17	45815154	intron variant	A/C	snv		0.62	9
rs6313	HTR2A	0.562	0.640	13	46895805	synonymous variant	G/A	snv	0.41	0.40	82
rs6311	HTR2A	0.645	0.640	13	46897343	upstream gene variant	C/T	snv		0.40	41
rs2072446	LOC100288866 ; MIR6165 ; NGFR	0.776	0.160	17	49510457	missense variant	C/T	snv	5.2E-02	4.1E-02	11
rs3810950	CHAT	0.882	0.080	10	49616573	missense variant	G/A	snv	0.21	0.18	3
rs9939609	FTO	0.559	0.720	16	53786615	intron variant	T/A	snv		0.41	98
rs4291	ACE	0.724	0.400	17	63476833	upstream gene variant	T/A;C	snv			20
rs776943620	ACE	0.851	0.120	17	63477287	missense variant	G/A	snv		2.1E-05	7
rs1799752	ACE	0.677	0.480	17	63488529	intron variant	-/TTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCATACAGTCACTTTT	delins			25
rs4986938	ESR2	0.641	0.600	14	64233098	3 prime UTR variant	C/T	snv	0.31	0.33	35
rs2289656	NTRK2	0.925	0.080	9	84948647	intron variant	G/A	snv	0.15	0.15	2
rs1045642	ABCB1	0.456	0.840	7	87509329	synonymous variant	A/G;T	snv	0.50		214
rs2032582	ABCB1	0.538	0.800	7	87531302	missense variant	A/C;T	snv	0.54; 3.8E-02		97
rs1128503	ABCB1	0.564	0.760	7	87550285	synonymous variant	A/G	snv	0.54	0.63	64
rs662	PON1	0.485	0.840	7	95308134	missense variant	T/C	snv	0.38	0.42	157