Disease: Low density lipoprotein cholesterol measurement
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1260326
GCKR
0.645 0.600 2 27508073 missense variant T/C;G snv 0.63; 4.0E-06 0.68 81
rs429358
APOE
0.590 0.600 19 44908684 missense variant T/C snv 0.14 0.16 66
rs7412
APOE
0.641 0.640 19 44908822 missense variant C/T snv 6.2E-02 7.9E-02 47
rs964184
ZPR1
0.716 0.440 11 116778201 3 prime UTR variant G/C snv 0.82 47
rs4420638
APOC1
0.708 0.520 19 44919689 downstream gene variant A/G snv 0.18 43
rs855791
TMPRSS6
0.701 0.400 22 37066896 missense variant A/G;T snv 0.57; 4.0E-06 38
rs635634 0.882 0.160 9 133279427 upstream gene variant T/A;C snv 22
rs1042034
APOB
0.851 0.240 2 21002409 missense variant C/T snv 0.70 0.78 15
rs2954021 1.000 0.040 8 125469835 intron variant A/G snv 0.54 15
rs7775698
HBS1L
1.000 0.080 6 135097497 intron variant C/T snv 6.9E-02 14
rs7776054
HBS1L
6 135097778 intron variant A/G snv 0.24 13
rs77542162
ABCA6
1.000 0.040 17 69085137 missense variant A/G snv 9.3E-03 1.0E-02 11
rs445925
APOC1
0.882 0.080 19 44912383 non coding transcript exon variant G/A;C snv 10
rs8177318
INHCAP ; TF
3 133748533 missense variant T/A snv 1.6E-04 2.9E-04 7
rs112259268 17 43797377 downstream gene variant C/A snv 1.9E-02 6
rs77960347
LIPG
18 49583585 missense variant A/C;G snv 4.0E-06; 8.7E-03 6
rs79220007
HFE
6 26098246 3 prime UTR variant T/C snv 3.8E-02 5
rs9411378
ABO
9 133270015 intron variant A/C;T snv 5
rs586178
RHCE
1 25420739 missense variant G/A;C snv 8.4E-05; 0.41 4
rs11456863 3 12230419 regulatory region variant T/-;TT;TTT;TTTTTTTTTTT delins 3
rs11784833
GRINA ; PARP10
8 143989244 intron variant T/C snv 0.27 3