DisGeNET - a database of gene-disease associations

List of associated variants

Adult Lymphoma, C1332206

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs1800871	IL19 ; IL10	0.508	0.800	1	206773289	5 prime UTR variant	A/G	snv		0.69	108
rs1800896	IL19 ; IL10	0.507	0.800	1	206773552	intron variant	T/C	snv		0.41	113
rs1800890	IL19	0.658	0.400	1	206776020	intron variant	A/T	snv		0.32	29
rs10494879	IL19	0.925	0.120	1	206778859	intron variant	C/A;G	snv		0.36	3
rs6676671	IL19	0.882	0.160	1	206779403	intron variant	T/A	snv		0.32	4
rs2466571	CD46	0.925	0.120	1	207766701	intron variant	G/T	snv		0.46	3
rs1805087	MTR	0.496	0.800	1	236885200	missense variant	A/G	snv	0.20	0.21	135
rs121913529	KRAS	0.492	0.680	12	25245350	missense variant	C/A;G;T	snv	4.0E-06		144
rs1057519781	ALK	0.807	0.160	2	29209816	missense variant	C/G	snv			9
rs3099844	MICB-DT	0.732	0.400	6	31481199	non coding transcript exon variant	C/A	snv		0.11	13
rs2071286	NOTCH4	0.752	0.280	6	32212119	intron variant	C/T	snv		0.17	12
rs2395185	HLA-DRB9	0.724	0.360	6	32465390	intron variant	G/T	snv		0.29	17
rs9461776	HLA-DRB1	0.763	0.240	6	32607958	intergenic variant	A/G	snv		8.8E-02	11
rs2231231	AQP3	0.851	0.240	9	33442988	non coding transcript exon variant	A/C	snv	0.67	0.69	5
rs535311760	TP73	0.925	0.120	1	3730979	missense variant	G/A	snv	1.2E-05; 8.2E-06		3
rs1351687973	TP73	0.925	0.120	1	3731497	missense variant	G/A	snv	1.6E-05		3
rs387907272	MYD88	0.572	0.520	3	38141150	stop lost	T/C	snv	5.2E-05	7.0E-06	73
rs61756766	TNFRSF13C	0.776	0.320	22	41925447	missense variant	G/A	snv	5.7E-03	5.7E-03	9
rs25487	XRCC1	0.441	0.800	19	43551574	missense variant	T/C	snv	0.68	0.71	205
rs13181	KLC3 ; ERCC2	0.487	0.760	19	45351661	stop gained	T/A;G	snv	4.0E-06; 0.32		134
rs1799793	ERCC2	0.557	0.640	19	45364001	missense variant	C/A;T	snv	7.1E-06; 0.29		72
rs1883832	CD40	0.581	0.680	20	46118343	5 prime UTR variant	T/C	snv	0.75	0.80	52
rs995922697	GPX1	0.724	0.560	3	49357413	missense variant	A/G	snv	4.1E-06		15
rs77375493	INSL6 ; JAK2	0.458	0.760	9	5073770	missense variant	G/A;T	snv	3.5E-04		187
rs708486	PTGDR	0.925	0.120	14	52274253	intron variant	A/G	snv		0.35	3