Disease: High density lipoprotein measurement
Source: GWASDB ×
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs13290420
ABCA1
9 104886684 intron variant T/C snv 0.16 3
rs13306436
IL6
7 22731677 3 prime UTR variant G/A snv 7.2E-04 3
rs1532625
CETP
16 56971389 splice region variant C/T snv 0.40 0.34 4
rs1540037
LOC105372112
18 49656294 TF binding site variant A/G snv 0.83 3
rs16942333
ACAN
15 88845033 intron variant A/G snv 3.3E-02 3
rs17240378
LCAT
16 67942790 intron variant G/C;T snv 4.0E-06 6
rs17243641
LOC105376326 ; TRAF2 ; MIR4479
9 136886986 intron variant G/T snv 2.6E-03 5
rs17513478
RIPK1
6 3101321 intron variant G/A snv 5.7E-03 5
rs180327
BUD13
11 116752943 intron variant C/T snv 0.58 5
rs1874148
VCL
10 74114657 intron variant A/G snv 1.8E-02 6
rs1943981
LOC105372112
18 49643445 intergenic variant A/G;T snv 0.74 3
rs2001945 8 125465736 upstream gene variant G/A;C;T snv 6
rs2072560
ZPR1 ; APOA5
11 116791110 missense variant T/C snv 0.89 0.94 5
rs2230667
IRF3
19 49662445 missense variant C/T snv 1.0E-04 1.4E-05 6
rs2231555
SOCS6
18 70324020 intron variant C/T snv 8.3E-03 3
rs2233548
OMP ; CAPN5
11 77102945 missense variant G/A;T snv 2.5E-03; 1.2E-05 3
rs2239051
CACNA1C
12 2343026 intron variant A/G snv 2.0E-03 4
rs2254819
ABCA1
9 104904133 intron variant T/C;G snv 3
rs2275544
ABCA1
9 104888931 intron variant T/C snv 0.14 3
rs2308939
CASP9
1 15506955 missense variant G/A;C;T snv 3.3E-04 3
rs235216
TNFRSF1B
1 12209567 downstream gene variant C/A;G;T snv 3
rs2575876
ABCA1
9 104903458 intron variant G/A snv 0.24 4
rs261336
ALDH1A2 ; LIPC ; LIPC-AS1
15 58450219 intron variant G/A snv 0.81 5
rs261338
LIPC ; LIPC-AS1 ; ALDH1A2
15 58442806 intron variant A/G snv 0.83 5
rs261341
LIPC ; ALDH1A2 ; LIPC-AS1
15 58439368 intron variant A/G snv 0.54 4