Disease: Diabetes
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1800562
LOC108783645 ; HFE
0.435 0.880 6 26092913 missense variant G/A snv 3.3E-02 3.8E-02 262
rs9939609
FTO
0.559 0.720 16 53786615 intron variant T/A snv 0.41 98
rs3184504
SH2B3 ; ATXN2
0.572 0.600 12 111446804 missense variant T/A;C;G snv 0.67 92
rs738409
PNPLA3
0.557 0.720 22 43928847 missense variant C/G snv 0.28 0.22 88
rs1260326
GCKR
0.645 0.600 2 27508073 missense variant T/C;G snv 0.63; 4.0E-06 0.68 81
rs780094
GCKR
0.658 0.400 2 27518370 intron variant T/C snv 0.67 62
rs1333049
CDKN2B-AS1
0.614 0.520 9 22125504 intron variant G/C snv 0.41 60
rs964184
ZPR1
0.716 0.440 11 116778201 3 prime UTR variant G/C snv 0.82 47
rs4420638
APOC1
0.708 0.520 19 44919689 downstream gene variant A/G snv 0.18 43
rs58542926
TM6SF2
0.630 0.440 19 19268740 missense variant C/T snv 6.5E-02 5.8E-02 42
rs10455872
LPA
0.662 0.320 6 160589086 intron variant A/G snv 4.3E-02 33
rs174547
FADS2 ; FADS1
0.742 0.240 11 61803311 intron variant T/C snv 0.28 33
rs662799
APOA5
0.689 0.480 11 116792991 upstream gene variant G/A snv 0.90 33
rs780093
GCKR
0.763 0.240 2 27519736 intron variant T/C snv 0.68 30
rs3135506
APOA5
0.708 0.400 11 116791691 missense variant G/A;C snv 3.0E-05; 6.8E-02 26
rs10401969
SUGP1
0.776 0.240 19 19296909 intron variant T/C snv 0.10 25
rs4506565
TCF7L2
0.790 0.280 10 112996282 intron variant A/G;T snv 22
rs4803750
BCL3
0.807 0.240 19 44744370 upstream gene variant A/G snv 7.7E-02 22
rs629301
CELSR2
0.851 0.120 1 109275684 3 prime UTR variant G/T snv 0.74 22
rs1169288
HNF1A-AS1 ; HNF1A
0.776 0.160 12 120978847 missense variant A/C;T snv 0.35 21
rs562338 0.807 0.160 2 21065449 intergenic variant A/G snv 0.69 21
rs2074755
BAZ1B
0.807 0.240 7 73462836 non coding transcript exon variant T/C snv 9.2E-02 20
rs247617 0.827 0.160 16 56956804 regulatory region variant C/A snv 0.29 20
rs261332
ALDH1A2 ; LIPC-AS1 ; LIPC
0.851 0.120 15 58435126 non coding transcript exon variant A/G snv 0.80 20
rs12579302
ATP2B1
0.851 0.120 12 89656726 intron variant A/G snv 0.15 19