DisGeNET - a database of gene-disease associations

List of shared variants

Mammary Neoplasms, C1458155

Disease: Squamous cell carcinoma of the head and neck

Source: CLINVAR ×

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	Num. diseases
rs1057519816	ERBB2	0.763	0.200	17	39711955	missense variant	C/A;T	snv		10
rs1057519895	FBXW7	0.724	0.240	4	152328232	missense variant	C/A;G;T	snv		14
rs747241612	FBXW7	0.752	0.240	4	152326215	missense variant	G/C	snv	4.0E-06	12
rs866987936	FBXW7	0.752	0.240	4	152326214	missense variant	C/A;G;T	snv		12
rs867384286	FBXW7	0.732	0.240	4	152328233	missense variant	G/A;C	snv	4.3E-06	14
rs11554273	GNAS	0.689	0.240	20	58909365	missense variant	C/A;G;T	snv	4.0E-06	17
rs121913495	GNAS	0.672	0.400	20	58909366	missense variant	G/A;T	snv		15
rs104894230	HRAS ; LRRC56	0.564	0.600	11	534288	missense variant	C/A;G;T	snv		36
rs121913233	HRAS ; LRRC56	0.627	0.520	11	533874	missense variant	T/A;C;G	snv		20
rs104894226	LRRC56 ; HRAS	0.658	0.560	11	534285	missense variant	C/A;G;T	snv		23
rs104894228	LRRC56 ; HRAS	0.605	0.560	11	534286	missense variant	C/A;G;T	snv		30
rs104894229	LRRC56 ; HRAS	0.564	0.600	11	534289	missense variant	C/A;G;T	snv		52
rs121913496	LRRC56 ; HRAS	0.724	0.440	11	533873	missense variant	C/A;G;T	snv		11
rs104886003	PIK3CA	0.562	0.440	3	179218303	missense variant	G/A;C	snv	4.0E-06	34
rs1057519925	PIK3CA	0.683	0.560	3	179210291	missense variant	G/A;C	snv		23
rs1057519926	PIK3CA	0.776	0.200	3	179210293	missense variant	A/T	snv		10
rs1057519927	PIK3CA	0.716	0.240	3	179218295	missense variant	A/C;G;T	snv		18
rs1057519928	PIK3CA	0.807	0.200	3	179221147	missense variant	A/C	snv		8
rs1057519929	PIK3CA	0.776	0.320	3	179199066	missense variant	G/A	snv		9
rs1057519932	PIK3CA	0.683	0.320	3	179234298	missense variant	T/G	snv		22
rs1057519933	PIK3CA	0.790	0.240	3	179199156	missense variant	A/G	snv		11
rs1057519934	PIK3CA	0.790	0.240	3	179199158	missense variant	G/C	snv		11
rs1057519935	PIK3CA	0.790	0.240	3	179199157	missense variant	A/G	snv		11
rs1057519936	PIK3CA	0.776	0.200	3	179234284	missense variant	A/G;T	snv		11
rs1057519937	PIK3CA	0.776	0.200	3	179234285	missense variant	T/C	snv		11