DisGeNET - a database of gene-disease associations

List of shared variants

Mammary Neoplasms, C1458155

Disease: Squamous cell carcinoma of the head and neck

Source: CLINVAR ×

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	Num. diseases
rs1057519983	TP53	0.724	0.360	17	7673797	missense variant	A/G	snv		16
rs1057519936	PIK3CA	0.776	0.200	3	179234284	missense variant	A/G;T	snv		11
rs121913279	PIK3CA	0.526	0.560	3	179234297	missense variant	A/G;T	snv	4.0E-06; 4.0E-06	45
rs1057519926	PIK3CA	0.776	0.200	3	179210293	missense variant	A/T	snv		10
rs121913286	PIK3CA	0.677	0.280	3	179218306	missense variant	C/A;G	snv		20
rs866775781	TP53	0.716	0.440	17	7675216	splice acceptor variant	C/A;G	snv		17
rs104894226	LRRC56 ; HRAS	0.658	0.560	11	534285	missense variant	C/A;G;T	snv		23
rs104894228	LRRC56 ; HRAS	0.605	0.560	11	534286	missense variant	C/A;G;T	snv		30
rs104894229	LRRC56 ; HRAS	0.564	0.600	11	534289	missense variant	C/A;G;T	snv		52
rs104894230	HRAS ; LRRC56	0.564	0.600	11	534288	missense variant	C/A;G;T	snv		36
rs1057519895	FBXW7	0.724	0.240	4	152328232	missense variant	C/A;G;T	snv		14
rs11540652	TP53	0.592	0.640	17	7674220	missense variant	C/A;G;T	snv	1.2E-05	42
rs11554273	GNAS	0.689	0.240	20	58909365	missense variant	C/A;G;T	snv	4.0E-06	17
rs121912655	TP53	0.724	0.400	17	7674238	missense variant	C/A;G;T	snv		15
rs121912656	TP53	0.662	0.560	17	7674229	missense variant	C/A;G;T	snv	4.0E-06; 4.0E-06	20
rs121912657	TP53	0.683	0.480	17	7673806	missense variant	C/A;G;T	snv	4.0E-06	15
rs121912660	TP53	0.683	0.240	17	7673781	missense variant	C/A;G;T	snv		18
rs121912664	TP53	0.630	0.320	17	7670699	missense variant	C/A;G;T	snv	1.2E-05	7
rs121913496	LRRC56 ; HRAS	0.724	0.440	11	533873	missense variant	C/A;G;T	snv		11
rs28934575	TP53	0.641	0.400	17	7674230	missense variant	C/A;G;T	snv		25
rs28934576	TP53	0.554	0.600	17	7673802	missense variant	C/A;G;T	snv	4.0E-06; 1.6E-05	39
rs483352697	TP53	0.695	0.480	17	7674944	missense variant	C/A;G;T	snv	4.0E-06	17
rs587778720	TP53	0.667	0.360	17	7674893	missense variant	C/A;G;T	snv	4.0E-06	25
rs587782664	TP53	0.742	0.320	17	7674252	missense variant	C/A;G;T	snv	4.0E-06	14
rs730882005	TP53	0.701	0.400	17	7674250	missense variant	C/A;G;T	snv	8.0E-06	20