DisGeNET - a database of gene-disease associations

List of shared variants

Mammary Neoplasms, C1458155

Disease: Squamous cell carcinoma of lung

Source: CLINVAR ×

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	Num. diseases
rs121912655	TP53	0.724	0.400	17	7674238	missense variant	C/A;G;T	snv		15
rs121912656	TP53	0.662	0.560	17	7674229	missense variant	C/A;G;T	snv	4.0E-06; 4.0E-06	20
rs121912660	TP53	0.683	0.240	17	7673781	missense variant	C/A;G;T	snv		18
rs121913496	LRRC56 ; HRAS	0.724	0.440	11	533873	missense variant	C/A;G;T	snv		11
rs28934575	TP53	0.641	0.400	17	7674230	missense variant	C/A;G;T	snv		25
rs28934576	TP53	0.554	0.600	17	7673802	missense variant	C/A;G;T	snv	4.0E-06; 1.6E-05	39
rs483352697	TP53	0.695	0.480	17	7674944	missense variant	C/A;G;T	snv	4.0E-06	17
rs587778720	TP53	0.667	0.360	17	7674893	missense variant	C/A;G;T	snv	4.0E-06	25
rs587782664	TP53	0.742	0.320	17	7674252	missense variant	C/A;G;T	snv	4.0E-06	14
rs730882008	TP53	0.683	0.440	17	7673775	missense variant	C/A;G;T	snv	4.0E-06	22
rs730882025	TP53	0.724	0.360	17	7674885	missense variant	C/A;G;T	snv		14
rs764146326	TP53	0.662	0.480	17	7673779	missense variant	C/A;G;T	snv	4.0E-06	20
rs866987936	FBXW7	0.752	0.240	4	152326214	missense variant	C/A;G;T	snv		12
rs193920774	TP53	0.695	0.440	17	7673823	missense variant	C/A;T	snv		21
rs587781288	TP53	0.732	0.440	17	7675190	missense variant	C/A;T	snv		15
rs587781991	TP53	0.724	0.240	17	7675208	missense variant	C/A;T	snv		14
rs786202962	TP53	0.701	0.320	17	7675085	missense variant	C/A;T	snv	4.0E-06	17
rs1057519912	MED12	0.776	0.200	X	71129408	missense variant	C/G;T	snv		5
rs121909224	PTEN	0.627	0.560	10	87933147	stop gained	C/G;T	snv	1.2E-05	35
rs121913281	PIK3CA	0.623	0.520	3	179234296	missense variant	C/T	snv		37
rs587777790	PIK3CA	0.732	0.280	3	179199690	missense variant	G/A	snv		12
rs867262025	PIK3CA	0.790	0.360	3	179221146	missense variant	G/A	snv		9
rs104886003	PIK3CA	0.562	0.440	3	179218303	missense variant	G/A;C	snv	4.0E-06	34
rs1057519925	PIK3CA	0.683	0.560	3	179210291	missense variant	G/A;C	snv		23
rs121912651	TP53	0.605	0.680	17	7674221	missense variant	G/A;C	snv	4.0E-06	37