Disease: Metabolic Syndrome X
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs10920501 0.827 0.120 1 190092815 downstream gene variant A/T snv 0.18 5
rs965384857
LPL
0.827 0.160 8 19954234 missense variant G/A snv 4.0E-06 5
rs268
LPL
0.637 0.480 8 19956018 missense variant A/G snv 1.3E-02 1.3E-02 41
rs328
LPL
0.732 0.440 8 19962213 stop gained C/G snv 9.2E-02 9.0E-02 19
rs2383207
CDKN2B-AS1
0.695 0.280 9 22115960 intron variant A/G snv 0.64 22
rs10757278
CDKN2B-AS1
0.620 0.520 9 22124478 intron variant A/G snv 0.40 44
rs1333048
CDKN2B-AS1
0.683 0.320 9 22125348 intron variant A/C snv 0.44 24
rs1333049
CDKN2B-AS1
0.614 0.520 9 22125504 intron variant G/C snv 0.41 60
rs2943634 0.763 0.200 2 226203364 intergenic variant A/C;G snv 15
rs2943641 0.763 0.160 2 226229029 intergenic variant T/C snv 0.67 18
rs1801278
IRS1
0.637 0.560 2 226795828 missense variant C/G;T snv 4.0E-06; 5.2E-02 38
rs1800797
IL6 ; IL6-AS1 ; STEAP1B
0.605 0.800 7 22726602 non coding transcript exon variant A/G snv 0.72 43
rs1800796
IL6-AS1 ; STEAP1B ; IL6
0.555 0.760 7 22726627 non coding transcript exon variant G/C snv 9.9E-02 74
rs699
AGT
0.501 0.800 1 230710048 missense variant A/G snv 0.55 0.58 134
rs4762
AGT
0.637 0.440 1 230710231 missense variant G/A snv 0.12 0.11 35
rs8192678
PPARGC1A
0.667 0.440 4 23814039 missense variant C/T snv 0.31 0.26 28
rs1007888
MIF-AS1
0.882 0.120 22 23898914 non coding transcript exon variant C/T snv 0.46 4
rs16147
LOC107986777 ; NPY
0.695 0.400 7 24283791 upstream gene variant T/C snv 0.48 18
rs16139
NPY ; LOC107986777
0.658 0.560 7 24285260 missense variant T/A;C snv 4.0E-06; 3.0E-02 36
rs1799945
LOC108783645 ; HFE
0.452 0.760 6 26090951 missense variant C/G;T snv 0.11 0.10 226
rs1800562
LOC108783645 ; HFE
0.435 0.880 6 26092913 missense variant G/A snv 3.3E-02 3.8E-02 262
rs780094
GCKR
0.658 0.400 2 27518370 intron variant T/C snv 0.67 62
rs780093
GCKR
0.763 0.240 2 27519736 intron variant T/C snv 0.68 30
rs6265
BDNF ; BDNF-AS
0.436 0.760 11 27658369 missense variant C/T snv 0.19 0.15 272
rs759834365
BDNF-AS ; BDNF
0.448 0.760 11 27658456 missense variant C/T snv 1.2E-05 237