DisGeNET - a database of gene-disease associations

List of shared variants

Precursor Cell Lymphoblastic Leukemia Lymphoma, C1961102

Disease: Adult Acute Lymphocytic Leukemia

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs1217691063	MTHFR	0.330	0.920	1	11796309	missense variant	A/G	snv	4.0E-06	7.0E-06	614
rs397507444	MTHFR	0.405	0.880	1	11794407	missense variant	T/G	snv			306
rs1800562	LOC108783645 ; HFE	0.435	0.880	6	26092913	missense variant	G/A	snv	3.3E-02	3.8E-02	262
rs1045642	ABCB1	0.456	0.840	7	87509329	synonymous variant	A/G;T	snv	0.50		214
rs1695	GSTP1	0.457	0.880	11	67585218	missense variant	A/G	snv	0.34	0.36	188
rs4880	SOD2	0.500	0.840	6	159692840	missense variant	A/G	snv	0.48	0.47	131
rs4938723	MIR34C ; BTG4 ; MIR34B ; LOC728196	0.574	0.680	11	111511840	intron variant	T/C	snv		0.32	60
rs755622	MIF-AS1 ; MIF	0.611	0.720	22	23894205	intron variant	G/C	snv		0.26	44
rs397507520	PTPN11	0.658	0.520	12	112453279	missense variant	G/C;T	snv			39
rs153109	IL27	0.623	0.600	16	28507775	intron variant	T/C	snv		0.43	37
rs2043211	CARD8	0.653	0.480	19	48234449	missense variant	A/T	snv	0.33	0.29	29
rs121913459	ABL1	0.672	0.160	9	130872896	missense variant	C/T	snv			25
rs17855750	IL27	0.695	0.480	16	28503907	missense variant	A/C;T	snv	6.4E-02; 4.0E-06		21
rs16754	WT1	0.732	0.240	11	32396399	synonymous variant	T/C	snv	0.24; 4.0E-06	0.17	15
rs2239633	CEBPE	0.742	0.240	14	23119848	upstream gene variant	G/A	snv		0.38	12
rs10821936	ARID5B	0.742	0.200	10	61963818	intron variant	C/T	snv		0.69	11
rs3824662	GATA3	0.752	0.320	10	8062245	intron variant	C/A;T	snv			11
rs3731217	CDKN2A	0.763	0.320	9	21984662	intron variant	A/C;T	snv			10
rs7089424	ARID5B	0.752	0.200	10	61992400	intron variant	T/G	snv		0.32	10
rs1142345	TPMT	0.776	0.280	6	18130687	missense variant	T/C;G	snv	3.7E-02		9
rs11978267	IKZF1	0.763	0.240	7	50398606	intron variant	A/G	snv		0.25	9
rs4132601	IKZF1	0.763	0.240	7	50402906	3 prime UTR variant	T/G	snv		0.25	9
rs1966862	ARHGAP24	0.790	0.120	4	85766908	intron variant	A/G	snv		0.14	8
rs10994982	ARID5B	0.790	0.120	10	61950345	intron variant	A/G	snv		0.49	7
rs924607	LOC105374608 ; LOC100996325	0.851	0.120	5	609978	intron variant	C/T	snv		0.32	7