DisGeNET - a database of gene-disease associations

List of shared variants

Blood Protein Measurement, C2985280

Disease: High density lipoprotein measurement

Source: GWASCAT ×

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs3184504	SH2B3 ; ATXN2	0.572	0.600	12	111446804	missense variant	T/A;C;G	snv	0.67		61
rs964184	ZPR1	0.716	0.440	11	116778201	3 prime UTR variant	G/C	snv		0.82	35
rs429358	APOE	0.590	0.600	19	44908684	missense variant	T/C	snv	0.14	0.16	26
rs7412	APOE	0.641	0.640	19	44908822	missense variant	C/T	snv	6.2E-02	7.9E-02	20
rs629301	CELSR2	0.851	0.120	1	109275684	3 prime UTR variant	G/T	snv		0.74	19
rs646776	CELSR2	0.752	0.240	1	109275908	downstream gene variant	C/T	snv		0.74	10
rs12740374	CELSR2	0.851	0.040	1	109274968	3 prime UTR variant	G/T	snv		0.22	9
rs4418728				10	93079967	downstream gene variant	G/T	snv		0.42	8
rs333947	CSF1			1	109928142	intron variant	G/A	snv		0.13	7
rs438811	APOC1			19	44913484	non coding transcript exon variant	C/T	snv		0.29	5
rs4665710				2	20998163	downstream gene variant	A/C	snv		0.76	5
rs1065853				19	44909976	non coding transcript exon variant	G/A;C;T	snv			4
rs5167	APOC2 ; APOC4-APOC2 ; APOC4	1.000	0.040	19	44945208	missense variant	T/A;G	snv	3.6E-05; 0.39		4
rs10864728	GALNT2			1	230169168	intron variant	A/G	snv		0.50	3
rs759819		1.000	0.080	19	54304302	intron variant	C/G;T	snv			3
rs7897379	REEP3			10	63541965	intron variant	T/C	snv		0.43	3
rs11751347				6	160671406	intron variant	C/T	snv		6.2E-02	2