Disease: Serum total cholesterol measurement
Source: GWASCAT ×
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs3184504
SH2B3 ; ATXN2
0.572 0.600 12 111446804 missense variant T/A;C;G snv 0.67 61
rs1260326
GCKR
0.645 0.600 2 27508073 missense variant T/C;G snv 0.63; 4.0E-06 0.68 55
rs964184
ZPR1
0.716 0.440 11 116778201 3 prime UTR variant G/C snv 0.82 35
rs429358
APOE
0.590 0.600 19 44908684 missense variant T/C snv 0.14 0.16 26
rs7412
APOE
0.641 0.640 19 44908822 missense variant C/T snv 6.2E-02 7.9E-02 20
rs629301
CELSR2
0.851 0.120 1 109275684 3 prime UTR variant G/T snv 0.74 19
rs635634 0.882 0.160 9 133279427 upstream gene variant T/A;C snv 17
rs2519093
ABO
0.882 0.200 9 133266456 intron variant T/C snv 14
rs516246
FUT2 ; LOC105447645
0.925 0.160 19 48702915 intron variant C/T snv 0.38 0.45 10
rs579459 0.752 0.320 9 133278724 upstream gene variant C/T snv 0.81 10
rs646776
CELSR2
0.752 0.240 1 109275908 downstream gene variant C/T snv 0.74 10
rs77542162
ABCA6
1.000 0.040 17 69085137 missense variant A/G snv 9.3E-03 1.0E-02 10
rs12740374
CELSR2
0.851 0.040 1 109274968 3 prime UTR variant G/T snv 0.22 9
rs550057
ABO
0.925 0.080 9 133271182 intron variant T/A;C snv 7
rs492602
LOC105447645 ; FUT2
0.925 0.120 19 48703160 synonymous variant A/G snv 0.38 0.45 6
rs507666
ABO
1.000 0.040 9 133273983 intron variant A/G snv 6
rs77303550
TXNL4B
16 72045758 intron variant C/T snv 0.19 6
rs1801689
APOH
17 66214462 missense variant A/C;G snv 4.0E-06; 2.4E-02; 4.8E-05 5
rs438811
APOC1
19 44913484 non coding transcript exon variant C/T snv 0.29 5
rs4665710 2 20998163 downstream gene variant A/C snv 0.76 5
rs9411378
ABO
9 133270015 intron variant A/C;T snv 5
rs1065853 19 44909976 non coding transcript exon variant G/A;C;T snv 4
rs17580
SERPINA1
0.776 0.160 14 94380925 missense variant T/A snv 2.3E-02 2.9E-02 4
rs6982502 0.882 0.080 8 125467120 intron variant C/T snv 0.62 4
rs191448950
USP24
1 55119171 intron variant G/A snv 6.4E-03 3