Disease Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Squamous cell carcinoma of the head and neck
0.500 Biomarker disease BEFREE We analyzed the alterations of p14(ARF), p16(INK4a) and p53 to study the contribution of each pathway in tumorigenesis of 29 patients with primary and consecutive (second primary) squamous cell carcinoma of the head and neck (HNSCC), with a total of 68 carcinomas. 12189502 2002
Squamous cell carcinoma of the head and neck
0.500 Biomarker disease BEFREE Heterogeneity of p16 immunohistochemistry and increased sensitivity of RNA in situ hybridization in cytology specimens of HPV-related head and neck squamous cell carcinoma. 31509355 2019
Squamous cell carcinoma of the head and neck
0.500 PosttranslationalModification disease BEFREE Fifty-one cases of SCCHN, collected from the paraffin block archives (1997-1999) in the Department of Pathology at the University of Arkansas for medical sciences, provided DNA for methylation-specific PCR using primers specific for hMLH1, MGMT, and p16. 15635575 2005
Squamous cell carcinoma of the head and neck
0.500 AlteredExpression disease BEFREE We conclude that HPV-positive HNSCC are characterized by p16 overexpression and low scores for pRb, CyclinD1, and a low combined pRb/CyclinD1 score. 26657876 2017
Squamous cell carcinoma of the head and neck
0.500 Biomarker disease BEFREE The mean age of patients with p16 negative HNSCC was 7 years older than p16 positive disease (Table ). 25964135 2015
Squamous cell carcinoma of the head and neck
0.500 PosttranslationalModification disease BEFREE We detected frequent methylation of p16 (44%), RASSF1A (18%), E-cadherin (53%), H-cadherin (35%), MGMT (35%), DAPK (53%), DCC (42%), COL1A2 (44%), TAC1 (61%), SST (64%), and GALR1 (44%) in HNSCC. 27027429 2016
Squamous cell carcinoma of the head and neck
0.500 GeneticVariation disease BEFREE To test this hypothesis, we conducted a hospital-based case-control study of 208 patients with SCCHN and 224 cancer-free control subjects to evaluate the association between p16 genotypes/haplotypes and the risk of SCCHN, using a PCR-single strand conformation polymorphism-based genotyping assay. 12101111 2002
Squamous cell carcinoma of the head and neck
0.500 Biomarker disease BEFREE To understand the association of candidate tumour suppressor genes SH3GL2, p16(INK4a), p14(ARF), and p15(INK4b) in the pathogenesis of head and neck squamous cell carcinoma (HNSCC), we studied the deletion, mutation, and methylation of these genes in 61 dysplastic lesions and 94 HNSCC samples. 19023882 2009
Squamous cell carcinoma of the head and neck
0.500 Biomarker disease BEFREE A simultaneous immunocytochemical detection of p16(INK4a) and Ki67 can reliably be performed on liquid-based cytological smears from HNSCC patients using a CINtec PLUS kit. 25557267 2015
Squamous cell carcinoma of the head and neck
0.500 AlteredExpression disease BEFREE The aim of the present study was to evaluate the prognostic and predictive impact of PTEN, cMET, and p16 expression in recurrent HNSCC. 30478503 2018
Squamous cell carcinoma of the head and neck
0.500 AlteredExpression disease BEFREE Here, we performed genome-wide expression profiling of HNSCC which revealed significant downregulation of the TFIIA downstream target CDKN2A. 29097782 2017
Squamous cell carcinoma of the head and neck
0.500 GeneticVariation disease BEFREE Human papillomavirus (HPV), p16 expression, and TP53 mutations are known prognostic factors in head and neck squamous cell carcinoma, but their role in squamous cell carcinoma of the anal canal (SCCAC) is less well established. 25871546 2015
Squamous cell carcinoma of the head and neck
0.500 Biomarker disease BEFREE Using the US Veterans Affairs database, we analyzed 1448 patients with locoregionally advanced HNSCC and known p16 status diagnosed between 2005 and 2015 and treated with surgery, radiotherapy, or chemoradiotherapy. 29878161 2018
Squamous cell carcinoma of the head and neck
0.500 GeneticVariation disease BEFREE 307 non-coding transcripts differentially expressed in HNSCC were significantly correlated with patient survival, and associated with mutations in TP53, CDKN2A, CASP8, PRDM9, and FBXW7 and copy number variations in chromosomes 3, 5, 7, and 18. 27323410 2016
Squamous cell carcinoma of the head and neck
0.500 AlteredExpression disease BEFREE RB1 alterations may have important prognostic implications, particularly in the context of high p16 expression, in both HPV-positive and HPV-negative HNSCC. 27859938 2017
Squamous cell carcinoma of the head and neck
0.500 Biomarker disease BEFREE Sequence analysis of the p16 RT-PCR product from these specimens allowed identification of mutational changes in the coding sequence of p16 in four of the SCCHN specimens. 16465427 2006
Squamous cell carcinoma of the head and neck
0.500 Biomarker disease BEFREE This suggests that p16 plays a limited role in the development of head and neck squamous cell carcinoma. 9816078 1995
Squamous cell carcinoma of the head and neck
0.500 Biomarker disease BEFREE The gene ratios c-MYC:cyclin-dependent kinase (CDK)N2A and CCND1:CDKN2A correlate with poor prognosis in squamous cell carcinoma of the head and neck. 12738730 2003
Squamous cell carcinoma of the head and neck
0.500 Biomarker disease BEFREE Copy number of the ATM gene and chromosome 11 were determined by FISH and HPV status was determined using p16(INK4A) immunohistochemistry in 87 paraffin embedded tumour samples from patients with HNSCC treated with chemoradiation at a single institution. 22410096 2012
Squamous cell carcinoma of the head and neck
0.500 GeneticVariation disease BEFREE Frequent mutation of p16 in squamous cell carcinoma of the head and neck. 9628511 1998
Squamous cell carcinoma of the head and neck
0.500 Biomarker disease BEFREE We summarize current biomarkers in order of clinical utility; p16 and human papillomavirus status remain the most important and validated biomarkers in HNSCC. 31573749 2019
Squamous cell carcinoma of the head and neck
0.500 Biomarker disease BEFREE In conclusion, the data emphasize the urge for further data on HPV-infection in HNSCC to, e.g. clarify to what extent survival benefits of p16INK4A-positive patients are truly attributed to HPV-infections. 25310104 2015
Squamous cell carcinoma of the head and neck
0.500 Biomarker disease BEFREE Significant differences were found in IGF-1 serum concentrations between patients with p16 positive and p16 negative HNSCC (p=0.0062), with higher IGF-1 levels in p16 positive tumors, between low-grade and high-grade cancers (p=0.0323) only in larynx, with elevated IGF-1 concentrations associated with high-grade and between recurrent and non-recurrent HNSCC (p=0.0354), with lower IGF-1 levels in recurrent tumors. 28551677 2017
Squamous cell carcinoma of the head and neck
0.500 Biomarker disease BEFREE Assessing both the expression level of the E6/E7 mRNAs and of CDKN2A in HNSCC is required to detect active HPV infection. 19795456 2010
Squamous cell carcinoma of the head and neck
0.500 Biomarker disease BEFREE Cyfra21-1 assay showed significant differences between tumors of different sites with prominent elevation being found in oropharyngeal carcinomas and between patients with p16 positive and p16 negative HNSCC (p=0.0242), being elevated in p16 positive tumors. 31519630 2019