TMEM106B, transmembrane protein 106B, 54664

N. diseases: 126; N. variants: 13
Source: ALL
Disease Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
CUI: C4693779
Disease: LEUKODYSTROPHY, HYPOMYELINATING, 16
LEUKODYSTROPHY, HYPOMYELINATING, 16
0.600 Biomarker disease GENOMICS_ENGLAND A recurrent de novo mutation in TMEM106B causes hypomyelinating leukodystrophy. 29186371 2017
CUI: C4693779
Disease: LEUKODYSTROPHY, HYPOMYELINATING, 16
LEUKODYSTROPHY, HYPOMYELINATING, 16
0.600 GeneticVariation disease UNIPROT A recurrent de novo mutation in TMEM106B causes hypomyelinating leukodystrophy. 29186371 2017
CUI: C4693779
Disease: LEUKODYSTROPHY, HYPOMYELINATING, 16
LEUKODYSTROPHY, HYPOMYELINATING, 16
0.600 Biomarker disease GENOMICS_ENGLAND
CUI: C4693779
Disease: LEUKODYSTROPHY, HYPOMYELINATING, 16
LEUKODYSTROPHY, HYPOMYELINATING, 16
0.600 GeneticVariation disease CLINVAR The recurrent mutation in TMEM106B also causes hypomyelinating leukodystrophy in China and is a CpG hotspot. 29444210 2018
CUI: C4693779
Disease: LEUKODYSTROPHY, HYPOMYELINATING, 16
LEUKODYSTROPHY, HYPOMYELINATING, 16
0.600 CausalMutation disease CLINVAR
CUI: C4693779
Disease: LEUKODYSTROPHY, HYPOMYELINATING, 16
LEUKODYSTROPHY, HYPOMYELINATING, 16
0.600 GeneticVariation disease UNIPROT The recurrent mutation in TMEM106B also causes hypomyelinating leukodystrophy in China and is a CpG hotspot. 29444210 2018
CUI: C4693779
Disease: LEUKODYSTROPHY, HYPOMYELINATING, 16
LEUKODYSTROPHY, HYPOMYELINATING, 16
0.600 GeneticVariation disease CLINVAR A recurrent de novo mutation in TMEM106B causes hypomyelinating leukodystrophy. 29186371 2017
CUI: C0751072
Disease: Frontotemporal Lobar Degeneration
Frontotemporal Lobar Degeneration
0.400 GeneticVariation disease BEFREE Common variants in TMEM106B serve as a distinct risk factor for TDP-43 pathology in older persons without FTLD. 25653292 2015
CUI: C0751072
Disease: Frontotemporal Lobar Degeneration
Frontotemporal Lobar Degeneration
0.400 AlteredExpression disease BEFREE These findings suggest that the up-regulation of TMEM106B may increase the risk of FTLD by directly causing neurotoxicity and a pathological phenotype linked to FTLD-TDP. 27563066 2016
CUI: C0751072
Disease: Frontotemporal Lobar Degeneration
Frontotemporal Lobar Degeneration
0.400 GeneticVariation disease BEFREE In contrast, the HpScl groups (HpScl and HpScl-AD) were more likely to exhibit genetic variants in GRN and TMEM106B that are associated with frontotemporal lobar degeneration. 24899141 2014
CUI: C0751072
Disease: Frontotemporal Lobar Degeneration
Frontotemporal Lobar Degeneration
0.400 GeneticVariation disease BEFREE Recent large genome-wide association studies have found variants in TMEM106B (top SNP rs1990622) as a strong risk factor for frontotemporal lobar degeneration. 24166182 2014
CUI: C0751072
Disease: Frontotemporal Lobar Degeneration
Frontotemporal Lobar Degeneration
0.400 GeneticVariation disease BEFREE Transmembrane Protein 106B SNP rs1990622 was recently shown to modify the risk of frontotemporal lobar degeneration with TDP-43 inclusions (FTD-TDP). 25096617 2015
CUI: C0751072
Disease: Frontotemporal Lobar Degeneration
Frontotemporal Lobar Degeneration
0.400 Biomarker disease BEFREE TMEM106B-related and GFRA2-related pathways might be future targets for treatments for FTLD, but the biological interaction between progranulin and these potential disease modifiers requires further study. 29724592 2018
CUI: C0751072
Disease: Frontotemporal Lobar Degeneration
Frontotemporal Lobar Degeneration
0.400 GeneticVariation disease BEFREE Remarkably, Tmem106b deletion from Grn<sup>-/-</sup> mice normalizes lysosomal protein levels and rescues FTLD-related behavioral abnormalities and retinal degeneration without improving lipofuscin, C1q, and microglial accumulation. 28728022 2017
CUI: C0751072
Disease: Frontotemporal Lobar Degeneration
Frontotemporal Lobar Degeneration
0.400 GeneticVariation disease BEFREE Defining the association of TMEM106B variants among frontotemporal lobar degeneration patients with GRN mutations and C9orf72 repeat expansions. 25085782 2014
CUI: C0751072
Disease: Frontotemporal Lobar Degeneration
Frontotemporal Lobar Degeneration
0.400 GeneticVariation disease BEFREE Membrane orientation and subcellular localization of transmembrane protein 106B (TMEM106B), a major risk factor for frontotemporal lobar degeneration. 22511793 2012
CUI: C0751072
Disease: Frontotemporal Lobar Degeneration
Frontotemporal Lobar Degeneration
0.400 Biomarker disease CTD_human Common variants at 7p21 are associated with frontotemporal lobar degeneration with TDP-43 inclusions. 20154673 2010
CUI: C0751072
Disease: Frontotemporal Lobar Degeneration
Frontotemporal Lobar Degeneration
0.400 AlteredExpression disease BEFREE In line with a potential pathological overlap of FTLD and NCL, Ctsd(-/-) mice, a model for NCL, show elevated levels of the FTLD-associated proteins GRN and TMEM106B. 24619111 2014
CUI: C0751072
Disease: Frontotemporal Lobar Degeneration
Frontotemporal Lobar Degeneration
0.400 Biomarker disease BEFREE TMEM106B has recently been identified as a genetic risk factor for frontotemporal lobar degeneration with TDP-43 inclusions (FTLD-TDP). 21104415 2011
CUI: C0751072
Disease: Frontotemporal Lobar Degeneration
Frontotemporal Lobar Degeneration
0.400 GeneticVariation disease BEFREE We investigated the rs1990622 polymorphism in relation to regional brain volumes to identify potential structures through which TMEM106B confers risk for frontotemporal lobar degeneration. 24731779 2014
CUI: C0751072
Disease: Frontotemporal Lobar Degeneration
Frontotemporal Lobar Degeneration
0.400 Biomarker disease BEFREE Thus, TMEM106B is a genetic modifier of FTLD with C9orf72 expansions. 24442578 2014
CUI: C0751072
Disease: Frontotemporal Lobar Degeneration
Frontotemporal Lobar Degeneration
0.400 AlteredExpression disease BEFREE To mimic elevated levels of TMEM106B in frontotemporal lobar degeneration (FTLD) cases, we generated transgenic mice expressing TMEM106B under the neuronal specific promoter, CamKII. 28126008 2017
CUI: C0751072
Disease: Frontotemporal Lobar Degeneration
Frontotemporal Lobar Degeneration
0.400 AlteredExpression disease BEFREE Expression of TMEM106B, the frontotemporal lobar degeneration-associated protein, in normal and diseased human brain. 24252750 2013
CUI: C0751072
Disease: Frontotemporal Lobar Degeneration
Frontotemporal Lobar Degeneration
0.400 GeneticVariation disease BEFREE This variant is in high LD with the TMEM106B non-synonymous variant p.T185S (rs3173615; r<sup>2</sup> = 0.98) which was previously identified as a protective variant for frontotemporal lobar degeneration (FTLD). 31456032 2020
CUI: C0751072
Disease: Frontotemporal Lobar Degeneration
Frontotemporal Lobar Degeneration
0.400 GeneticVariation disease BEFREE We further identified a significant association of TMEM106B SNPs with plasma GRN levels in controls (top SNP rs1990622, corrected p = 0.002) and in peripheral blood samples a highly significant correlation was observed between TMEM106B and GRN mRNA expression in patients with FTLD (r = -0.63, p = 7.7 × 10(-5)) and controls (r = -0.49, p = 2.2 × 10(-10)). 21178100 2011