Disease Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Precursor Cell Lymphoblastic Leukemia Lymphoma
0.500 Biomarker disease BEFREE An 11-year-old male patient with the deletion of <i>IKZF1</i> (Ikaros family zinc finger 1) and positive Breakpoint Cluster Region-C-Abelson oncogene 1(<i>BCR-ABL1</i>) acute lymphoblastic leukemia developed mucositis, gastrointestinal toxicity, hepatotoxicity, myelosuppression, and severe dermatologic toxicity during the first and second courses of high-dose methotrexate. 31607921 2019
Precursor Cell Lymphoblastic Leukemia Lymphoma
0.500 Biomarker disease BEFREE <i>IKZF1</i> gene defects are associated with inferior treatment outcome in both childhood and adult B-cell precursor acute lymphoblastic leukemia and occur in more than 70% of <i>BCR-ABL1</i>-positive and <i>BCR-ABL1</i>-like cases of acute lymphoblastic leukemia. 29519871 2018
Precursor Cell Lymphoblastic Leukemia Lymphoma
0.500 Biomarker disease BEFREE Loss-of-function but not dominant-negative intragenic <i>IKZF1</i> deletions are associated with an adverse prognosis in adult <i>BCR-ABL</i>-negative acute lymphoblastic leukemia. 28751559 2017
Precursor Cell Lymphoblastic Leukemia Lymphoma
0.500 Biomarker disease BEFREE The genomic profile of ETV6-ABL1 acute lymphoblastic leukemia resembled that of BCR-ABL1 and BCR-ABL1-like cases with 80% of patients having concurrent CDKN2A/B and IKZF1 deletions. 27229714 2016
Precursor Cell Lymphoblastic Leukemia Lymphoma
0.500 Biomarker disease BEFREE Alternative chimeric proteins, BCR-ABLp190 and BCR-ABLp210, are produced that are characteristic of chronic myelogenous leukemia (CML) and acute lymphoblastic leukemia (Ph1-ALL) respectively. 11697484 2001
Precursor Cell Lymphoblastic Leukemia Lymphoma
0.500 GeneticVariation disease BEFREE Recurrent genetic abnormalities in B-lymphoblastic leukemia with prognostic significance are well known and specifically delineated in the WHO 2008 classification (eg hyperdiploidy, t(9;22)(q34;q11.2); BCR-ABL1, t(12;21)(p13;q22); ETV6-RUNX1). 21822204 2011
Precursor Cell Lymphoblastic Leukemia Lymphoma
0.500 GeneticVariation disease BEFREE IKZF1 and CRLF2 gene alterations correlate with poor prognosis in Japanese BCR-ABL1-negative high-risk B-cell precursor acute lymphoblastic leukemia. 23804397 2013
Precursor Cell Lymphoblastic Leukemia Lymphoma
0.500 AlteredExpression disease BEFREE PAX5 mutations occur frequently in adult B-cell progenitor acute lymphoblastic leukemia and PAX5 haploinsufficiency is associated with BCR-ABL1 and TCF3-PBX1 fusion genes: a GRAALL study. 19587702 2009
Precursor Cell Lymphoblastic Leukemia Lymphoma
0.500 GeneticVariation disease BEFREE Primary established genetic abnormalities in B-cell precursor acute lymphoblastic leukemia include high hyperdiploidy (51-65 chromosomes), the translocations t(12;21)(p13;q22)/ETV6-RUNX1 fusion and t(9;22)(q34;q11)/BCR-ABL1 fusion, MLL rearrangements and intrachromosomal amplification of chromosome 21. 24816234 2014
Precursor Cell Lymphoblastic Leukemia Lymphoma
0.500 Biomarker disease BEFREE The ABL-BCR fusion protein is a constitutively activated tyrosine kinase thought to play a central role in chronic myeloid leukemia (CML) and Philadelphia (Ph) chromosome acute lymphoid leukemia (ALL). 18603297 2008
Precursor Cell Lymphoblastic Leukemia Lymphoma
0.500 GeneticVariation disease BEFREE BCR/ABL fluorescent in situ hybridization study of chronic myeloid leukemia (CML) and Philadelphia(+) (Ph(+)) acute lymphoid leukemia (ALL) indicated that approximately 9% of patients exhibited an atypical hybridization pattern consistent with a submicroscopic deletion of the 5' region of ABL and the 3' region of the BCR genes on the 9q(+) chromosome. 11369654 2001
Precursor Cell Lymphoblastic Leukemia Lymphoma
0.500 Biomarker disease HPO
Precursor Cell Lymphoblastic Leukemia Lymphoma
0.500 GeneticVariation disease BEFREE Complex chromosome 9, 20, and 22 rearrangements in acute lymphoblastic leukemia with duplication of BCR and ABL sequences. 10640143 2000
Precursor Cell Lymphoblastic Leukemia Lymphoma
0.500 GeneticVariation disease BEFREE The prognostic value of IKZF1 deletions was evaluated in 2 cohorts of BCR-ABL1-positive BCP-ALL patients, before tyrosine kinase inhibitors (pre-TKI) and after introduction of imatinib (in the European Study for Philadelphia-Acute Lymphoblastic Leukemia [EsPhALL]). 24366361 2014
Precursor Cell Lymphoblastic Leukemia Lymphoma
0.500 Biomarker disease BEFREE IKZF1 deletions were associated with B-cell precursor acute lymphoblastic leukemia (P=0.036), BCR-ABL1-positive acute lymphoblastic leukemia (P<0.001), and higher white blood cell counts (P=0.005). 25261097 2015
Precursor Cell Lymphoblastic Leukemia Lymphoma
0.500 Biomarker disease BEFREE There have been successful examples of targeted therapy improving the outcome of some childhood cancers, such as the addition of an ABL class tyrosine kinase inhibitor to conventional chemotherapy substantially improving the cure rate for patients with BCR-ABL1 positive acute lymphoblastic leukemia. 31563145 2020
Precursor Cell Lymphoblastic Leukemia Lymphoma
0.500 Biomarker disease BEFREE Interphase FISH for BCR-ABL1 rearrangement on neutrophils: A decisive tool to discriminate a lymphoid blast crisis of chronic myeloid leukemia from a de novo BCR-ABL1 positive acute lymphoblastic leukemia. 28444777 2018
Precursor Cell Lymphoblastic Leukemia Lymphoma
0.500 Biomarker disease BEFREE BCR-ABL1 induces aberrant splicing of IKAROS and lineage infidelity in pre-B lymphoblastic leukemia cells. 16205638 2006
Precursor Cell Lymphoblastic Leukemia Lymphoma
0.500 GeneticVariation disease BEFREE Four patients presented with B-lymphoblastic leukemia (B-ALL), and of them, two patients with t(8;9)(p22;p24.1) were proven to be B-lymphoblastic crisis of MPN; and the other two cases with t(9p24;v) both were de novo B-ALL, BCR-ABL1-like (Ph-like). 30401948 2019
Precursor Cell Lymphoblastic Leukemia Lymphoma
0.500 Biomarker disease BEFREE Identification and characterization of a murine model of BCR‑ABL1+ acute B‑lymphoblastic leukemia with central nervous system metastasis. 31173268 2019
Precursor Cell Lymphoblastic Leukemia Lymphoma
0.500 Biomarker disease BEFREE The breakpoint cluster region-ABL proto-oncogene 1 (<i>BCR-ABL</i>) rearrangement leads to a p210 chimeric protein in typical chronic myeloid leukemia (CML), whereas 17-25% of patients with acute lymphocytic leukemia and 0.9-3% patients with <i>de novo</i> acute myeloid leukemia (AML) carry a p190<sup>BCR-ABL</sup> fusion protein. 29151902 2017
Precursor Cell Lymphoblastic Leukemia Lymphoma
0.500 Biomarker disease BEFREE The aim of this study was to characterize the rearrangements on 9p involving PAX5 and their clinical significance in adults with BCR-ABL1-positive acute lymphoblastic leukemia. 20534699 2010
Precursor Cell Lymphoblastic Leukemia Lymphoma
0.500 GeneticVariation disease BEFREE These include new subtypes of acute myeloid leukemia defined by mutations in <i>RUNX1</i> or <i>BCR-ABL1</i> translocations as well as a constellation of somatic structural DNA alterations in acute lymphoblastic leukemia. 28600336 2017
Precursor Cell Lymphoblastic Leukemia Lymphoma
0.500 Biomarker disease BEFREE We have mapped breakpoints within the 8.3-kb BamHI breakpoint cluster region in 31 patients with acute lymphoblastic leukemia and acute myeloid leukemia (AML) de novo and in 8 t-AML patients. 8634439 1996
Precursor Cell Lymphoblastic Leukemia Lymphoma
0.500 AlteredExpression disease LHGDN Frequency of BCR-ABL fusion oncogene in Pakistani childhood acute lymphoid leukemia (ALL) patients reflects ethnic differences in molecular genetics of ALL. 17762503 2007