Disease Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
CUI: C2936664
Disease: Acquired Hypogammaglobulinemia
Acquired Hypogammaglobulinemia
0.010 Biomarker disease BEFREE Accelerated Loss of TCR Repertoire Diversity in Common Variable Immunodeficiency. 27481850 2016
CUI: C0001175
Disease: Acquired Immunodeficiency Syndrome
Acquired Immunodeficiency Syndrome
0.020 GeneticVariation group BEFREE We describe three cases of immunodeficiency-associated lymphomas, two in patients with acquired immunodeficiency syndrome (AIDS) and one in a patient with a renal transplant, in which both immunoglobulin and TCR gene rearrangements were identified. 7943530 1994
CUI: C0001175
Disease: Acquired Immunodeficiency Syndrome
Acquired Immunodeficiency Syndrome
0.020 Biomarker group BEFREE TCR usage may significantly influence CD8+ T cell-mediated control of AIDS viruses; however, the potential to modulate the repertoire of functional virus-specific T cells by immunotherapy has not been explored. 17579081 2007
CUI: C0151332
Disease: Active tuberculosis
Active tuberculosis
0.010 Biomarker disease BEFREE A Diverse Lipid Antigen-Specific TCR Repertoire Is Clonally Expanded during Active Tuberculosis. 29914888 2018
CUI: C0701807
Disease: Acute anterior uveitis
Acute anterior uveitis
0.010 Biomarker disease BEFREE IL-17F, GM- CSF, and IL-22 represent potentially novel targets in AAU.<i>Conclusion:</i> Our report is arguably the first to implicate IL-17F or ILC-3 and MAIT cells in the pathogenesis of AAU.<b>Abbreviations</b> AAU: acute anterior uveitis; AxSpA: axial spondyloarthritis; BASDAI: Bath ankylosing spondylitis disease activity index; CCR: chemokine receptor; DMSO: dimethylsulfoxide; EULAR:European League Against Rheumatism; FACS: fluorescence activated cell sorter; FBS: fetal bovine serum; FSC: orward light scatter; GM-CSF: granulocyte-macrophage colony stimulating factor; HC: healthy control; ILC: innate lymphoid cell; KIR: killer immunoglobulin receptor; MAIT: mucosal associated immune T cell; ND: not detected; NK: natural killer cell; OHSU-Oregon Health & Science University; PBMC: peripheral blood mononuclear cell; SSC: side light scatter; TCR: T cell receptor. 31763950 2019
CUI: C0023464
Disease: Acute biphenotypic leukemia
Acute biphenotypic leukemia
0.020 GeneticVariation disease BEFREE Although most AMLL cases with lymphoid morphology had Ig and TCR gene rearrangements associated with a variety of immunophenotypes and karyotypes, two Ph+ AMLL-ALL cases had many similar features (B/My immunophenotype; IgH with or without TCR rearrangements; Ig light chain genes germline) to their Ph+ AMLL-AML counterparts. 2033959 1991
CUI: C0023464
Disease: Acute biphenotypic leukemia
Acute biphenotypic leukemia
0.020 GeneticVariation disease BEFREE Immunoglobulin (Ig) and T-cell receptor (TCR) gene rearrangements, correlating with myeloid-lymphoid immunophenotype in AMLL, support the hypothesis of lineage infidelity of early progenitor cells, rather than the aberrant antigen expression. 11342300 2001
CUI: C0856825
Disease: Acute GVH disease
Acute GVH disease
0.020 GeneticVariation disease BEFREE The incidences of grades 2 to 4 acute graft-versus-host disease (GVHD) in the TCR and CD34 groups were 28% and 29%, respectively, and 21% and 10% (<i>P</i> = .1), respectively, for extensive chronic GVHD. 29431621 2018
CUI: C0856825
Disease: Acute GVH disease
Acute GVH disease
0.020 Biomarker disease BEFREE Results show that both aGVHD and minimal residual disease (MRD) eradication did significantly affect TCR gamma/delta profile. 16249028 2006
CUI: C0275518
Disease: Acute infectious disease
Acute infectious disease
0.020 Biomarker group BEFREE Notwithstanding, P. brasiliensis-infected mice showed an increased frequency of prohibitive TCR-expressing T cells in the spleens, suggesting that the selection processes that occur in the thymus may be compromised during the acute infection. 27189089 2016
CUI: C0275518
Disease: Acute infectious disease
Acute infectious disease
0.020 Biomarker group BEFREE However, in the context of chronic infections, it is unclear what the overall profile of TCR affinity for Ag is and if it differs from acute infections. 29777029 2018
CUI: C0085669
Disease: Acute leukemia
Acute leukemia
0.090 GeneticVariation disease BEFREE In order to clarify whether HTLV-I plays a role as a virus-encoded superantigen in the neoplastic process, we examined the TCR V beta families in the peripheral blood at four different clinical stages: carrier, smoldering leukemia, chronic leukemia, and acute leukemia. 8638605 1996
CUI: C0085669
Disease: Acute leukemia
Acute leukemia
0.090 GeneticVariation disease BEFREE By screening for immunoglobulin (Ig) and T-cell receptor (TCR) gene rearrangements in bone marrow samples aspirated at different time points during the course of disease from 43 patients with acute leukaemia we have analysed the extent of clonal evolution after autologous bone marrow transplantation (ABMT) and addressed the issue of whether the Southern Blot method has the power to reveal clonal proliferations representing minimal residual disease (MRD) in the autologous bone marrow grafts. 8698127 1996
CUI: C0085669
Disease: Acute leukemia
Acute leukemia
0.090 Biomarker disease BEFREE To examine the distribution of rearrangements of the gamma- and beta-chain T-cell receptor (TCR) genes in T- and non-T acute lymphoblastic leukemias (ALLs), and potentially to determine which genes rearrange first in ontogeny, we analyzed high molecular weight DNA from 102 patients with acute leukemia. 2955409 1987
CUI: C0085669
Disease: Acute leukemia
Acute leukemia
0.090 GeneticVariation disease BEFREE Five cases of acute leukemia (AL) with the t(4;11) translocation were investigated for the immunoglobulin heavy chain, kappa, lambda, TCR beta and TCR gamma gene rearrangements. 1375695 1992
CUI: C0085669
Disease: Acute leukemia
Acute leukemia
0.090 Biomarker disease BEFREE PCR-based monitoring of minimal residual disease (MRD) in acute leukemias can be achieved via detection of fusion gene transcripts of chromosome aberrations or detection of immunoglobulin (Ig) and T cell receptor (TCR) gene rearrangements. 11896540 2002
CUI: C0085669
Disease: Acute leukemia
Acute leukemia
0.090 Biomarker disease BEFREE T-cell receptor delta (TCR-delta) gene rearrangement was studied in 40 cases of acute leukaemia and lymphoma of T-cell lineage at diagnosis. 8756082 1996
CUI: C0085669
Disease: Acute leukemia
Acute leukemia
0.090 Biomarker disease BEFREE Its use allowed detection of previously unsuspected TCR alpha/delta rearrangements in 4/13 (30%) immature T-lineage acute leukemias, including two t(10;14) and 2 minor inversion 14s. 9242557 1997
CUI: C0085669
Disease: Acute leukemia
Acute leukemia
0.090 AlteredExpression disease BEFREE Inappropriately rearranged IgH or TCR genes are usually not expressed at the mRNA level, and the gene for the TCR associated protein T3 delta is not detectably expressed at the mRNA or protein level in leukemias classified unambiguously as non-T. Five cases of acute leukemia with ambiguous or mixed lineage immunophenotypes (myeloid + T or myeloid + B) are described. 3118113 1987
CUI: C0085669
Disease: Acute leukemia
Acute leukemia
0.090 Biomarker disease BEFREE In this study, we analysed 49 children with acute leukaemia (29 B-precursor acute lymphoblastic leukaemia (ALL), 5 relapsed cALL, 6 T-ALL, 7 acute non-lymphocytic (ANLL) and 2 mixed lineage leukaemias), for the presence of different immune system gene rearrangements (Ig JH, C kappa, C lambda, TCR J gamma, C beta, J delta and J alpha) by Southern blot hybridisation. 7786608 1995
CUI: C0023449
Disease: Acute lymphocytic leukemia
Acute lymphocytic leukemia
0.100 Biomarker disease BEFREE We next analyzed TCR delta rearrangements in five CD3+TCR gamma/delta+ ALL and cell lines. 2547833 1989
CUI: C0023449
Disease: Acute lymphocytic leukemia
Acute lymphocytic leukemia
0.100 GeneticVariation disease BEFREE An order of TCR gene rearrangements was observed in T-ALL, with the rearrangement of delta gene preceding that of gamma gene. 8187567 1994
CUI: C0023449
Disease: Acute lymphocytic leukemia
Acute lymphocytic leukemia
0.100 GeneticVariation disease BEFREE Microsatellite markers and fluorescence in situ hybridization identified deletions of the unrearranged TEL allele and IGH/TCR gene rearrangements were analyzed; the results show that posttreatment relapse cells in 2 patients with TEL-AML1-positive ALL were not derived from the dominant clone present at diagnosis but were from a sibling clone. 11468150 2001
CUI: C0023449
Disease: Acute lymphocytic leukemia
Acute lymphocytic leukemia
0.100 Biomarker disease BEFREE A case of acute lymphoblastic leukemia (ALL) was encountered in which the two clonal gamma T-cell receptor gene (TCR gamma) rearrangements found in bone marrow (BM) samples at relapse both differed from the single clonal TCR gamma rearrangement present in BM obtained at diagnosis 5 years previously. 1309670 1992
CUI: C0023449
Disease: Acute lymphocytic leukemia
Acute lymphocytic leukemia
0.100 Biomarker disease BEFREE Since TEL-AML1 has been reported to induce cell cycle retardation and thus may influence somatic recombination, we analyzed 214 TEL-AML1-positive ALL by PCR for rearrangements of the immunoglobulin (Ig) and T-cell receptor (TCR) genes. 14574333 2004