SEMA3A, semaphorin 3A, 10371

N. diseases: 202; N. variants: 19
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs11766001
rs11766001
Entrez Id: 10371
Gene Symbol: SEMA3A
SEMA3A
CUI: C0019569
Disease:
Hirschsprung Disease
0.010 GeneticVariation BEFREE Furthermore, the frequencies of SEMA3 rs11766001 risk allele in HSCR cases and controls were 1.7 and 0.8 %, respectively. 27469503 2016
dbSNP: rs137871935
rs137871935
Entrez Id: 10371
Gene Symbol: SEMA3A
SEMA3A
CUI: C3554021
Disease:
HYPOGONADOTROPIC HYPOGONADISM 16 WITH OR WITHOUT ANOSMIA
0.700 GeneticVariation UNIPROT SEMA3A deletion in a family with Kallmann syndrome validates the role of semaphorin 3A in human puberty and olfactory system development. 22416012 2012
dbSNP: rs137871935
rs137871935
Entrez Id: 10371
Gene Symbol: SEMA3A
SEMA3A
CUI: C3554021
Disease:
HYPOGONADOTROPIC HYPOGONADISM 16 WITH OR WITHOUT ANOSMIA
0.700 GeneticVariation UNIPROT SEMA3A, a gene involved in axonal pathfinding, is mutated in patients with Kallmann syndrome. 22927827 2012
dbSNP: rs137871935
rs137871935
Entrez Id: 10371
Gene Symbol: SEMA3A
SEMA3A
CUI: C3554021
Disease:
HYPOGONADOTROPIC HYPOGONADISM 16 WITH OR WITHOUT ANOSMIA
0.700 GeneticVariation UNIPROT The prevalence of CHD7 missense versus truncating mutations is higher in patients with Kallmann syndrome than in typical CHARGE patients. 25077900 2014
dbSNP: rs138694505
rs138694505
Entrez Id: 10371
Gene Symbol: SEMA3A
SEMA3A
CUI: C0018790
Disease:
Cardiac Arrest
0.010 GeneticVariation BEFREE A high incidence of SEMA3A(I334V) in UCA patients and inappropriate innervation patterning in their hearts implicate involvement of the SEMA3A gene in the pathogenesis of UCA. 23593010 2013
dbSNP: rs138952094
rs138952094
Entrez Id: 10371
Gene Symbol: SEMA3A
SEMA3A
CUI: C0034012
Disease:
Delayed Puberty
A 0.700 GeneticVariation CLINVAR
dbSNP: rs139295139
rs139295139
Entrez Id: 10371
Gene Symbol: SEMA3A
SEMA3A
CUI: C3554021
Disease:
HYPOGONADOTROPIC HYPOGONADISM 16 WITH OR WITHOUT ANOSMIA
0.700 GeneticVariation UNIPROT SEMA3A, a gene involved in axonal pathfinding, is mutated in patients with Kallmann syndrome. 22927827 2012
dbSNP: rs139295139
rs139295139
Entrez Id: 10371
Gene Symbol: SEMA3A
SEMA3A
CUI: C3554021
Disease:
HYPOGONADOTROPIC HYPOGONADISM 16 WITH OR WITHOUT ANOSMIA
0.700 GeneticVariation UNIPROT SEMA3A deletion in a family with Kallmann syndrome validates the role of semaphorin 3A in human puberty and olfactory system development. 22416012 2012
dbSNP: rs139295139
rs139295139
Entrez Id: 10371
Gene Symbol: SEMA3A
SEMA3A
CUI: C3554021
Disease:
HYPOGONADOTROPIC HYPOGONADISM 16 WITH OR WITHOUT ANOSMIA
0.700 GeneticVariation UNIPROT The prevalence of CHD7 missense versus truncating mutations is higher in patients with Kallmann syndrome than in typical CHARGE patients. 25077900 2014
dbSNP: rs139438618
rs139438618
Entrez Id: 10371
Gene Symbol: SEMA3A
SEMA3A
CUI: C1269683
Disease:
Major Depressive Disorder
G 0.710 GeneticVariation GWASCAT Under the linear regression model, rs139438618 at the semaphorin 3A (SEMA3A [OMIM 603961]) locus was significantly associated with AD and MD comorbidity in African American participants in the Yale-Penn 1 sample (β = 0.89; 95% CI, 0.57-1.20; P = 2.76 × 10-8). 29071344 2017
dbSNP: rs139438618
rs139438618
Entrez Id: 10371
Gene Symbol: SEMA3A
SEMA3A
CUI: C1269683
Disease:
Major Depressive Disorder
0.710 GeneticVariation BEFREE Under the linear regression model, rs139438618 at the semaphorin 3A (SEMA3A [OMIM 603961]) locus was significantly associated with AD and MD comorbidity in African American participants in the Yale-Penn 1 sample (β = 0.89; 95% CI, 0.57-1.20; P = 2.76 × 10-8). 29071344 2017
dbSNP: rs139438618
rs139438618
Entrez Id: 10371
Gene Symbol: SEMA3A
SEMA3A
CUI: C0001973
Disease:
Alcoholic Intoxication, Chronic
0.710 GeneticVariation BEFREE Under the linear regression model, rs139438618 at the semaphorin 3A (SEMA3A [OMIM 603961]) locus was significantly associated with AD and MD comorbidity in African American participants in the Yale-Penn 1 sample (β = 0.89; 95% CI, 0.57-1.20; P = 2.76 × 10-8). 29071344 2017
dbSNP: rs139438618
rs139438618
Entrez Id: 10371
Gene Symbol: SEMA3A
SEMA3A
CUI: C0001973
Disease:
Alcoholic Intoxication, Chronic
G 0.710 GeneticVariation GWASCAT Under the linear regression model, rs139438618 at the semaphorin 3A (SEMA3A [OMIM 603961]) locus was significantly associated with AD and MD comorbidity in African American participants in the Yale-Penn 1 sample (β = 0.89; 95% CI, 0.57-1.20; P = 2.76 × 10-8). 29071344 2017
dbSNP: rs139438618
rs139438618
Entrez Id: 10371
Gene Symbol: SEMA3A
SEMA3A
CUI: C0236664
Disease:
Alcohol-Related Disorders
G 0.700 GeneticVariation GWASCAT Genetic Risk Variants Associated With Comorbid Alcohol Dependence and Major Depression. 29071344 2017
dbSNP: rs139438618
rs139438618
Entrez Id: 10371
Gene Symbol: SEMA3A
SEMA3A
CUI: C0236970
Disease:
Alcohol-Induced Disorders
G 0.700 GeneticVariation GWASCAT Genetic Risk Variants Associated With Comorbid Alcohol Dependence and Major Depression. 29071344 2017
dbSNP: rs139438618
rs139438618
Entrez Id: 10371
Gene Symbol: SEMA3A
SEMA3A
CUI: C0041696
Disease:
Unipolar Depression
0.010 GeneticVariation BEFREE Under the linear regression model, rs139438618 at the semaphorin 3A (SEMA3A [OMIM 603961]) locus was significantly associated with AD and MD comorbidity in African American participants in the Yale-Penn 1 sample (β = 0.89; 95% CI, 0.57-1.20; P = 2.76 × 10-8). 29071344 2017
dbSNP: rs143007146
rs143007146
Entrez Id: 10371
Gene Symbol: SEMA3A
SEMA3A
CUI: C0006142
Disease:
Malignant neoplasm of breast
0.700 GeneticVariation UNIPROT
dbSNP: rs147436181
rs147436181
Entrez Id: 10371
Gene Symbol: SEMA3A
SEMA3A
CUI: C0036220
Disease:
Kaposi Sarcoma
0.010 GeneticVariation BEFREE Three heterozygous variants (c.458A>G (p.Asn153Ser), c.1253A>G (p.Asn418Ser), and c.1303G>A (p.Val435Ile)) were found in SEMA3A in three KS patients, two of which also had a mutation in FGFR1. 24522099 2014
dbSNP: rs1487309678
rs1487309678
Entrez Id: 10371
Gene Symbol: SEMA3A
SEMA3A
CUI: C0158646
Disease:
Cleft palate with cleft lip
0.010 GeneticVariation BEFREE Two novel heterozygous missense mutations in FGFR1, (NM_001174066): c.776G>A (p.G259E) and (NM_001174066): c.358C>T (p.R120C), were identified in a 23-year-old KS male with cleft lip and an 18-year-old KS patient with cleft lip and palate, dental agenesis, and high arched palate, respectively. 26199944 2015
dbSNP: rs1487309678
rs1487309678
Entrez Id: 10371
Gene Symbol: SEMA3A
SEMA3A
CUI: C4321245
Disease:
Cleft lip or lips
0.010 GeneticVariation BEFREE Two novel heterozygous missense mutations in FGFR1, (NM_001174066): c.776G>A (p.G259E) and (NM_001174066): c.358C>T (p.R120C), were identified in a 23-year-old KS male with cleft lip and an 18-year-old KS patient with cleft lip and palate, dental agenesis, and high arched palate, respectively. 26199944 2015
dbSNP: rs1487309678
rs1487309678
Entrez Id: 10371
Gene Symbol: SEMA3A
SEMA3A
CUI: C0008924
Disease:
Cleft upper lip
0.010 GeneticVariation BEFREE Two novel heterozygous missense mutations in FGFR1, (NM_001174066): c.776G>A (p.G259E) and (NM_001174066): c.358C>T (p.R120C), were identified in a 23-year-old KS male with cleft lip and an 18-year-old KS patient with cleft lip and palate, dental agenesis, and high arched palate, respectively. 26199944 2015
dbSNP: rs1487309678
rs1487309678
Entrez Id: 10371
Gene Symbol: SEMA3A
SEMA3A
CUI: C0240635
Disease:
Byzanthine arch palate
0.010 GeneticVariation BEFREE Two novel heterozygous missense mutations in FGFR1, (NM_001174066): c.776G>A (p.G259E) and (NM_001174066): c.358C>T (p.R120C), were identified in a 23-year-old KS male with cleft lip and an 18-year-old KS patient with cleft lip and palate, dental agenesis, and high arched palate, respectively. 26199944 2015
dbSNP: rs1487309678
rs1487309678
Entrez Id: 10371
Gene Symbol: SEMA3A
SEMA3A
CUI: C0162809
Disease:
Kallmann Syndrome
0.010 GeneticVariation BEFREE Two novel heterozygous missense mutations in FGFR1, (NM_001174066): c.776G>A (p.G259E) and (NM_001174066): c.358C>T (p.R120C), were identified in a 23-year-old KS male with cleft lip and an 18-year-old KS patient with cleft lip and palate, dental agenesis, and high arched palate, respectively. 26199944 2015
dbSNP: rs199979628
rs199979628
Entrez Id: 10371
Gene Symbol: SEMA3A
SEMA3A
CUI: C3554021
Disease:
HYPOGONADOTROPIC HYPOGONADISM 16 WITH OR WITHOUT ANOSMIA
0.700 GeneticVariation UNIPROT
dbSNP: rs199979628
rs199979628
Entrez Id: 10371
Gene Symbol: SEMA3A
SEMA3A
CUI: C0162809
Disease:
Kallmann Syndrome
0.010 GeneticVariation BEFREE By analyzing protein expression and processing, we did not observe any differences of the p.I668V variant compared with wild-type SEMA3A, while a pathogenic SEMA3A variant p.R66W recently described in a patient with Kallmann syndrome did affect protein secretion. 29432577 2018