COLEC10, collectin subfamily member 10, 10584

N. diseases: 70; N. variants: 92
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs773764995
rs773764995
Entrez Id: 10584
Gene Symbol: COLEC10
COLEC10
CUI: C0796032
Disease:
Malpuech facial clefting syndrome
G 0.800 CausalMutation CLINVAR
dbSNP: rs1060505022
rs1060505022
Entrez Id: 10584
Gene Symbol: COLEC10
COLEC10
CUI: C0796032
Disease:
Malpuech facial clefting syndrome
T 0.700 CausalMutation CLINVAR
dbSNP: rs149010496
rs149010496
Entrez Id: 10584;101927513
Gene Symbol: COLEC10;LOC101927513
COLEC10;LOC101927513
CUI: C0796032
Disease:
Malpuech facial clefting syndrome
T 0.700 CausalMutation CLINVAR
dbSNP: rs12679857
rs12679857
Entrez Id: 10584
Gene Symbol: COLEC10
COLEC10
CUI: C0011854
Disease:
Diabetes Mellitus, Insulin-Dependent
0.800 GeneticVariation GWASCAT A genome-wide meta-analysis of six type 1 diabetes cohorts identifies multiple associated loci. 21980299 2011
dbSNP: rs12679857
rs12679857
Entrez Id: 10584
Gene Symbol: COLEC10
COLEC10
CUI: C0011854
Disease:
Diabetes Mellitus, Insulin-Dependent
0.800 GeneticVariation GWASDB A genome-wide meta-analysis of six type 1 diabetes cohorts identifies multiple associated loci. 21980299 2011
dbSNP: rs6469804
rs6469804
Entrez Id: 10584
Gene Symbol: COLEC10
COLEC10
CUI: C0521170
Disease:
Osteoporotic Fractures
0.020 GeneticVariation BEFREE A significant gene-gene interaction for osteoporotic fracture involving rs1107748 in SOST and rs6469804 in OPG gene was identified from generalized multifactor dimensionality reduction analysis. 20554715 2010
dbSNP: rs2073618
rs2073618
Entrez Id: 4982;10584
Gene Symbol: TNFRSF11B;COLEC10
TNFRSF11B;COLEC10
CUI: C0027651
Disease:
Neoplasms
0.010 GeneticVariation BEFREE Additional analysis showed significant differences when comparing patients with invasive vs. non-invasive tumors (OPG rs2073618) as well as in terms of tumor localization (RANK rs35211496) and body mass index (RANKL rs9533156 and rs1054016). 23369128 2013
dbSNP: rs6469804
rs6469804
Entrez Id: 10584
Gene Symbol: COLEC10
COLEC10
CUI: C0521170
Disease:
Osteoporotic Fractures
0.020 GeneticVariation BEFREE Among the nine SNPs genotyped, rs6469804 and rs2073618 showed significant associations with both BMD and osteoporotic fractures, while rs3102735 was only associated with BMD in our samples (P < 0.05). 28496203 2017
dbSNP: rs2073618
rs2073618
Entrez Id: 4982;10584
Gene Symbol: TNFRSF11B;COLEC10
TNFRSF11B;COLEC10
CUI: C0521170
Disease:
Osteoporotic Fractures
0.020 GeneticVariation BEFREE Among the nine SNPs genotyped, rs6469804 and rs2073618 showed significant associations with both BMD and osteoporotic fractures, while rs3102735 was only associated with BMD in our samples (P < 0.05). 28496203 2017
dbSNP: rs3102735
rs3102735
Entrez Id: 4982;10584
Gene Symbol: TNFRSF11B;COLEC10
TNFRSF11B;COLEC10
CUI: C0521170
Disease:
Osteoporotic Fractures
0.010 GeneticVariation BEFREE Among the nine SNPs genotyped, rs6469804 and rs2073618 showed significant associations with both BMD and osteoporotic fractures, while rs3102735 was only associated with BMD in our samples (P < 0.05). 28496203 2017
dbSNP: rs2062375
rs2062375
Entrez Id: 10584
Gene Symbol: COLEC10
COLEC10
CUI: C0029456
Disease:
Osteoporosis
G 0.800 GeneticVariation GWASDB An integration of genome-wide association study and gene expression profiling to prioritize the discovery of novel susceptibility Loci for osteoporosis-related traits. 20548944 2010
dbSNP: rs2062375
rs2062375
Entrez Id: 10584
Gene Symbol: COLEC10
COLEC10
CUI: C0029456
Disease:
Osteoporosis
G 0.800 GeneticVariation GWASCAT An integration of genome-wide association study and gene expression profiling to prioritize the discovery of novel susceptibility Loci for osteoporosis-related traits. 20548944 2010
dbSNP: rs3102735
rs3102735
Entrez Id: 4982;10584
Gene Symbol: TNFRSF11B;COLEC10
TNFRSF11B;COLEC10
CUI: C0029456
Disease:
Osteoporosis
0.020 GeneticVariation BEFREE Both VDR-rs2228570-T and OPG-rs3102735-G and their interactions are related to the increased risk of osteoporosis. 30624097 2019
dbSNP: rs2073618
rs2073618
Entrez Id: 4982;10584
Gene Symbol: TNFRSF11B;COLEC10
TNFRSF11B;COLEC10
CUI: C0011860
Disease:
Diabetes Mellitus, Non-Insulin-Dependent
0.020 GeneticVariation BEFREE By considering the possible role of OPG in diabetic retinopathy (DR) we examined two of the most studied polymorphisms of the OPG genes rs2073618 (located in exon I) and rs3134069 (located in the promoter region) and their relation to DR in Slovenian patients with type 2 diabetes. 24228244 2013
dbSNP: rs3134069
rs3134069
Entrez Id: 4982;10584
Gene Symbol: TNFRSF11B;COLEC10
TNFRSF11B;COLEC10
CUI: C0011860
Disease:
Diabetes Mellitus, Non-Insulin-Dependent
0.020 GeneticVariation BEFREE By considering the possible role of OPG in diabetic retinopathy (DR) we examined two of the most studied polymorphisms of the OPG genes rs2073618 (located in exon I) and rs3134069 (located in the promoter region) and their relation to DR in Slovenian patients with type 2 diabetes. 24228244 2013
dbSNP: rs773764995
rs773764995
Entrez Id: 10584
Gene Symbol: COLEC10
COLEC10
CUI: C0796032
Disease:
Malpuech facial clefting syndrome
0.800 GeneticVariation UNIPROT COLEC10 is mutated in 3MC patients and regulates early craniofacial development. 28301481 2017
dbSNP: rs13261635
rs13261635
Entrez Id: 10584;101927513
Gene Symbol: COLEC10;LOC101927513
COLEC10;LOC101927513
CUI: C0007117
Disease:
Basal cell carcinoma
C 0.700 GeneticVariation GWASCAT Combined analysis of keratinocyte cancers identifies novel genome-wide loci. 31174203 2019
dbSNP: rs13261635
rs13261635
Entrez Id: 10584;101927513
Gene Symbol: COLEC10;LOC101927513
COLEC10;LOC101927513
CUI: C0751676
Disease:
Basal Cell Cancer
C 0.700 GeneticVariation GWASCAT Combined analysis of keratinocyte cancers identifies novel genome-wide loci. 31174203 2019
dbSNP: rs13261635
rs13261635
Entrez Id: 10584;101927513
Gene Symbol: COLEC10;LOC101927513
COLEC10;LOC101927513
CUI: C0206710
Disease:
Basal Cell Neoplasm
C 0.700 GeneticVariation GWASCAT Combined analysis of keratinocyte cancers identifies novel genome-wide loci. 31174203 2019
dbSNP: rs2073618
rs2073618
Entrez Id: 4982;10584
Gene Symbol: TNFRSF11B;COLEC10
TNFRSF11B;COLEC10
CUI: C2936258
Disease:
Peri-Implantitis
0.010 GeneticVariation BEFREE CONCLUSIONS OPG rs2073618 polymorphism may be related to the risk of peri-implantitis, but not rs2073617. 27828936 2016
dbSNP: rs3102735
rs3102735
Entrez Id: 4982;10584
Gene Symbol: TNFRSF11B;COLEC10
TNFRSF11B;COLEC10
CUI: C0029456
Disease:
Osteoporosis
0.020 GeneticVariation BEFREE For A163G (rs3102735), the combined results showed that the G allele of the A163G polymorphism may be associated with an increased risk of osteoporosis. 24283361 2014
dbSNP: rs2073618
rs2073618
Entrez Id: 4982;10584
Gene Symbol: TNFRSF11B;COLEC10
TNFRSF11B;COLEC10
CUI: C0029456
Disease:
Osteoporosis
0.030 GeneticVariation BEFREE For G1181C (rs2073618), however, we found that individuals with the C allele of the G1181C polymorphism had a decreased risk of osteoporosis, especially in Asian and postmenopausal woman subgroups. 24283361 2014
dbSNP: rs3134070
rs3134070
Entrez Id: 4982;10584
Gene Symbol: TNFRSF11B;COLEC10
TNFRSF11B;COLEC10
CUI: C0029456
Disease:
Osteoporosis
0.020 GeneticVariation BEFREE For meta-analyses, data for a total of 12 SNPs were pooled (4725 patients and 37804 controls), and five SNPs, including rs6993813, rs6469804, rs3134070, rs2073618 and rs3102734, showed association with osteoporosis fractures (P < 0.05). 28496203 2017
dbSNP: rs3102734
rs3102734
Entrez Id: 4982;10584
Gene Symbol: TNFRSF11B;COLEC10
TNFRSF11B;COLEC10
CUI: C0029456
Disease:
Osteoporosis
0.010 GeneticVariation BEFREE For meta-analyses, data for a total of 12 SNPs were pooled (4725 patients and 37804 controls), and five SNPs, including rs6993813, rs6469804, rs3134070, rs2073618 and rs3102734, showed association with osteoporosis fractures (P < 0.05). 28496203 2017
dbSNP: rs2073618
rs2073618
Entrez Id: 4982;10584
Gene Symbol: TNFRSF11B;COLEC10
TNFRSF11B;COLEC10
CUI: C0029899
Disease:
Otosclerosis
0.010 GeneticVariation BEFREE Furthermore, meta-analysis provided evidence of association of the c.9C>G polymorphism with OTSC. 25998045 2015