Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs1060499749
rs1060499749
Entrez Id: 11122
Gene Symbol: PTPRT
PTPRT
CUI: C4021085
Disease:
Abnormality of brain morphology 		A 0.700 GeneticVariation CLINVAR
dbSNP: rs1217327426
rs1217327426
Entrez Id: 11122
Gene Symbol: PTPRT
PTPRT
CUI: C0009402
Disease:
Colorectal Carcinoma 		0.700 GeneticVariation UNIPROT
dbSNP: rs1371429276
rs1371429276
Entrez Id: 11122
Gene Symbol: PTPRT
PTPRT
CUI: C0024623
Disease:
Malignant neoplasm of stomach 		0.700 GeneticVariation UNIPROT
dbSNP: rs1812007
rs1812007
Entrez Id: 11122
Gene Symbol: PTPRT
PTPRT
CUI: C0023467
Disease:
Leukemia, Myelocytic, Acute 		C 0.700 GeneticVariation GWASCAT Genome-wide haplotype association study identify the FGFR2 gene as a risk gene for acute myeloid leukemia. 27903959 2017
dbSNP: rs1883536
rs1883536
Entrez Id: 11122;101927138
Gene Symbol: PTPRT;LOC101927138
PTPRT;LOC101927138
CUI: C0023467
Disease:
Leukemia, Myelocytic, Acute 		G 0.700 GeneticVariation GWASCAT Genome-wide haplotype association study identify the FGFR2 gene as a risk gene for acute myeloid leukemia. 27903959 2017
dbSNP: rs2038210
rs2038210
Entrez Id: 11122
Gene Symbol: PTPRT
PTPRT
CUI: C0596887
Disease:
mathematical ability 		G 0.700 GeneticVariation GWASCAT Gene discovery and polygenic prediction from a genome-wide association study of educational attainment in 1.1 million individuals. 30038396 2018
dbSNP: rs2038210
rs2038210
Entrez Id: 11122
Gene Symbol: PTPRT
PTPRT
CUI: C0596887
Disease:
mathematical ability 		A 0.700 GeneticVariation GWASCAT Gene discovery and polygenic prediction from a genome-wide association study of educational attainment in 1.1 million individuals. 30038396 2018
dbSNP: rs206636
rs206636
Entrez Id: 11122
Gene Symbol: PTPRT
PTPRT
CUI: C0023467
Disease:
Leukemia, Myelocytic, Acute 		A 0.700 GeneticVariation GWASCAT Genome-wide haplotype association study identify the FGFR2 gene as a risk gene for acute myeloid leukemia. 27903959 2017
dbSNP: rs206636
rs206636
Entrez Id: 11122
Gene Symbol: PTPRT
PTPRT
CUI: C0023467
Disease:
Leukemia, Myelocytic, Acute 		C 0.700 GeneticVariation GWASCAT Genome-wide haplotype association study identify the FGFR2 gene as a risk gene for acute myeloid leukemia. 27903959 2017
dbSNP: rs206637
rs206637
Entrez Id: 11122
Gene Symbol: PTPRT
PTPRT
CUI: C0023467
Disease:
Leukemia, Myelocytic, Acute 		A 0.700 GeneticVariation GWASCAT Genome-wide haplotype association study identify the FGFR2 gene as a risk gene for acute myeloid leukemia. 27903959 2017
dbSNP: rs206640
rs206640
Entrez Id: 11122
Gene Symbol: PTPRT
PTPRT
CUI: C0023467
Disease:
Leukemia, Myelocytic, Acute 		G 0.700 GeneticVariation GWASCAT Genome-wide haplotype association study identify the FGFR2 gene as a risk gene for acute myeloid leukemia. 27903959 2017
dbSNP: rs206652
rs206652
Entrez Id: 11122;105372623
Gene Symbol: PTPRT;LOC105372623
PTPRT;LOC105372623
CUI: C0023467
Disease:
Leukemia, Myelocytic, Acute 		C 0.700 GeneticVariation GWASCAT Genome-wide haplotype association study identify the FGFR2 gene as a risk gene for acute myeloid leukemia. 27903959 2017
dbSNP: rs206670
rs206670
Entrez Id: 11122
Gene Symbol: PTPRT
PTPRT
CUI: C0023467
Disease:
Leukemia, Myelocytic, Acute 		C 0.700 GeneticVariation GWASCAT Genome-wide haplotype association study identify the FGFR2 gene as a risk gene for acute myeloid leukemia. 27903959 2017
dbSNP: rs206683
rs206683
Entrez Id: 11122
Gene Symbol: PTPRT
PTPRT
CUI: C0023467
Disease:
Leukemia, Myelocytic, Acute 		G 0.700 GeneticVariation GWASCAT Genome-wide haplotype association study identify the FGFR2 gene as a risk gene for acute myeloid leukemia. 27903959 2017
dbSNP: rs208208
rs208208
Entrez Id: 11122
Gene Symbol: PTPRT
PTPRT
CUI: C0023467
Disease:
Leukemia, Myelocytic, Acute 		G 0.700 GeneticVariation GWASCAT Genome-wide haplotype association study identify the FGFR2 gene as a risk gene for acute myeloid leukemia. 27903959 2017
dbSNP: rs2750074
rs2750074
Entrez Id: 11122
Gene Symbol: PTPRT
PTPRT
CUI: C0023467
Disease:
Leukemia, Myelocytic, Acute 		T 0.700 GeneticVariation GWASCAT Genome-wide haplotype association study identify the FGFR2 gene as a risk gene for acute myeloid leukemia. 27903959 2017
dbSNP: rs2866943
rs2866943
Entrez Id: 11122;101927182
Gene Symbol: PTPRT;LOC101927182
PTPRT;LOC101927182
CUI: C0279626
Disease:
Squamous cell carcinoma of esophagus 		0.010 GeneticVariation BEFREE Our findings have shown that the SNP rs2866943 in PTPRT 3'-UTR, through disrupting the regulatory role of miR-218 in PTPRT expression, rs2866943 in PTPRT might act as a protective factor in the pathogenesis of ESCC. 25967969 2015
dbSNP: rs2866947
rs2866947
Entrez Id: 11122;101927182
Gene Symbol: PTPRT;LOC101927182
PTPRT;LOC101927182
CUI: C0596887
Disease:
mathematical ability 		G 0.700 GeneticVariation GWASCAT Gene discovery and polygenic prediction from a genome-wide association study of educational attainment in 1.1 million individuals. 30038396 2018
dbSNP: rs370873414
rs370873414
Entrez Id: 11122;101927182
Gene Symbol: PTPRT;LOC101927182
PTPRT;LOC101927182
CUI: C0009402
Disease:
Colorectal Carcinoma 		0.700 GeneticVariation UNIPROT
dbSNP: rs490514
rs490514
Entrez Id: 11122
Gene Symbol: PTPRT
PTPRT
CUI: C0010068
Disease:
Coronary heart disease 		0.010 GeneticVariation BEFREE We find GW significant (P<5.0 × 10(-8)) evidence of 4 additional CHD </span>susceptibility loci at 4q31.22 (rs1400558, upstream of EDNRA, Pall=1.63 × 10(-9)), 9p24.2 (rs7863990, close to SMARCA2, Pall=3.71 × 10(-14)), 12q24.13 (rs2433752, upstream of TBX3 and TBX5, Pall=1.04 × 10(-10)) and 20q12 (rs490514, in PTPRT, Pall=1.20 × 10(-13)). 26283027 2015
dbSNP: rs511805
rs511805
Entrez Id: 11122
Gene Symbol: PTPRT
PTPRT
CUI: C0023467
Disease:
Leukemia, Myelocytic, Acute 		C 0.700 GeneticVariation GWASCAT Genome-wide haplotype association study identify the FGFR2 gene as a risk gene for acute myeloid leukemia. 27903959 2017
dbSNP: rs535000
rs535000
Entrez Id: 11122
Gene Symbol: PTPRT
PTPRT
CUI: C0023467
Disease:
Leukemia, Myelocytic, Acute 		C 0.700 GeneticVariation GWASCAT Genome-wide haplotype association study identify the FGFR2 gene as a risk gene for acute myeloid leukemia. 27903959 2017
dbSNP: rs558832
rs558832
Entrez Id: 11122
Gene Symbol: PTPRT
PTPRT
CUI: C0023467
Disease:
Leukemia, Myelocytic, Acute 		G 0.700 GeneticVariation GWASCAT Genome-wide haplotype association study identify the FGFR2 gene as a risk gene for acute myeloid leukemia. 27903959 2017
dbSNP: rs6016916
rs6016916
Entrez Id: 11122
Gene Symbol: PTPRT
PTPRT
CUI: C0023467
Disease:
Leukemia, Myelocytic, Acute 		T 0.700 GeneticVariation GWASCAT Genome-wide haplotype association study identify the FGFR2 gene as a risk gene for acute myeloid leukemia. 27903959 2017
dbSNP: rs6016917
rs6016917
Entrez Id: 11122
Gene Symbol: PTPRT
PTPRT
CUI: C0023467
Disease:
Leukemia, Myelocytic, Acute 		C 0.700 GeneticVariation GWASCAT Genome-wide haplotype association study identify the FGFR2 gene as a risk gene for acute myeloid leukemia. 27903959 2017