Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs703842
rs703842
Entrez Id: 1594;4234
Gene Symbol: CYP27B1;METTL1
CYP27B1;METTL1
CUI: C0026769
Disease:
Multiple Sclerosis
0.840 GeneticVariation BEFREE The 'C' allele of CYP27B1 rs703842 was inversely associated with MS risk; this association appeared stronger among HLA-DR15 negative (OR = 0.79, 95% CI: 0.69, 0.90) compared to HLA-DR15 positive individuals (OR = 0.91, 95% CI: 0.80, 1.04). 21431378 2011
dbSNP: rs703842
rs703842
Entrez Id: 1594;4234
Gene Symbol: CYP27B1;METTL1
CYP27B1;METTL1
CUI: C0026769
Disease:
Multiple Sclerosis
0.840 GeneticVariation BEFREE No association of rs703842 with MS disability progression or calcidiol serum level was found. 30875612 2019
dbSNP: rs703842
rs703842
Entrez Id: 1594;4234
Gene Symbol: CYP27B1;METTL1
CYP27B1;METTL1
CUI: C0026769
Disease:
Multiple Sclerosis
0.840 GeneticVariation BEFREE As a result, we could not perform meta-analysis for assessing the relationship in other ethnic groups.In summary, we found that the genetic variant rs703842 in CYP27B1 is associated with MS risk in Caucasians. 27175669 2016
dbSNP: rs703842
rs703842
Entrez Id: 1594;4234
Gene Symbol: CYP27B1;METTL1
CYP27B1;METTL1
CUI: C0026769
Disease:
Multiple Sclerosis
0.840 GeneticVariation BEFREE We found that the frequencies of the A allele of rs703842 were higher in MS patients than controls (p=0.032), and statistical differences were observed in the genotypes of both rs703842 (p=0.013) and rs10876994 (p=0.001) between NMO patients and controls. 25542806 2015
dbSNP: rs1057520815
rs1057520815
Entrez Id: 1594
Gene Symbol: CYP27B1
CYP27B1
CUI: C0268689
Disease:
Vitamin D-dependent rickets, type 1
0.710 GeneticVariation BEFREE A novel G102E mutation of CYP27B1 in a large family with vitamin D-dependent rickets type 1. 20534770 2010
dbSNP: rs10877012
rs10877012
Entrez Id: 1594;4234
Gene Symbol: CYP27B1;METTL1
CYP27B1;METTL1
CUI: C0009402
Disease:
Colorectal Carcinoma
0.020 GeneticVariation BEFREE Individuals carrying the GG genotype of CYP27B1 G > T (rs10877012) exhibited decreased CRC risk compared with those with the TT genotype (OR<sub>adjusted</sub> (OR<sub>adj</sub>) = 0.57, 95% Confidence Interval (CI) = 0.38-0.84). 28821819 2017
dbSNP: rs10877012
rs10877012
Entrez Id: 1594;4234
Gene Symbol: CYP27B1;METTL1
CYP27B1;METTL1
CUI: C0009402
Disease:
Colorectal Carcinoma
0.020 GeneticVariation BEFREE Dietary habits, lifestyle, and polymorphisms in VDR (ApaI), CYP24A1 (rs6013897, rs158552, rs17217119) and CYP27B1 (rs10877012) were associated with a higher risk of CRC. 28009432 2017
dbSNP: rs10877012
rs10877012
Entrez Id: 1594;4234
Gene Symbol: CYP27B1;METTL1
CYP27B1;METTL1
CUI: C0019196
Disease:
Hepatitis C
0.010 GeneticVariation BEFREE In addition, the CYP27B1-1260 promoter polymorphism rs10877012 had substantial impact on 1,25-dihydroxyvitamin D serum levels (72, 61, and 60 pmol/ml for rs10877012 AA, AC, and CC, respectively, p=0.04) and on SVR rates in HCV genotype 1, 2, and 3 infected patients (77% and 65% versus 42% for rs10877012 AA, AC, and CC, respectively, p=0.02). 21145801 2011
dbSNP: rs10877012
rs10877012
Entrez Id: 1594;4234
Gene Symbol: CYP27B1;METTL1
CYP27B1;METTL1
CUI: C0238463
Disease:
Papillary thyroid carcinoma
0.010 GeneticVariation BEFREE German patients (n=253) with DTC (papillary thyroid carcinoma [PTC] and follicular thyroid carcinoma [FTC]) and HC (n=302) were genotyped for polymorphisms within the vitamin D metabolizing enzymes such as 25-hydroxylase (CYP2R1[rs12794714, rs10741657]), 25-hydroxyvitamin D-1α-hydroxylase (CYP27B1[rs10877012, rs4646536]), and 25-hydroxyvitamin D 24-hydrolase (CYP24A1[rs927650, rs2248137, rs2296241]). 22690899 2012
dbSNP: rs10877012
rs10877012
Entrez Id: 1594;4234
Gene Symbol: CYP27B1;METTL1
CYP27B1;METTL1
CUI: C4722172
Disease:
Primary differentiated carcinoma of thyroid gland
0.010 GeneticVariation BEFREE German patients (n=253) with DTC (papillary thyroid carcinoma [PTC] and follicular thyroid carcinoma [FTC]) and HC (n=302) were genotyped for polymorphisms within the vitamin D metabolizing enzymes such as 25-hydroxylase (CYP2R1[rs12794714, rs10741657]), 25-hydroxyvitamin D-1α-hydroxylase (CYP27B1[rs10877012, rs4646536]), and 25-hydroxyvitamin D 24-hydrolase (CYP24A1[rs927650, rs2248137, rs2296241]). 22690899 2012
dbSNP: rs10877012
rs10877012
Entrez Id: 1594;4234
Gene Symbol: CYP27B1;METTL1
CYP27B1;METTL1
CUI: C0524910
Disease:
Hepatitis C, Chronic
0.010 GeneticVariation BEFREE Associations between a functionally relevant polymorphism in the gene encoding the vitamin D 1α-hydroxylase (CYP27B1-1260 rs10877012) and the response to treatment with pegylated interferon-α (PEG-IFN-α) and ribavirin were determined in 701 patients with chronic hepatitis C. In addition, associations between serum concentrations of 25-hydroxyvitamin D(3) (25[OH]D(3)) and treatment outcome were analysed. 22808108 2012
dbSNP: rs10877012
rs10877012
Entrez Id: 1594;4234
Gene Symbol: CYP27B1;METTL1
CYP27B1;METTL1
CUI: C0008149
Disease:
Chlamydia Infections
0.010 GeneticVariation BEFREE This study assesses the impact of eight polymorphisms in five genes [VDR (rs1544410 G > A, rs2228570 C > T), CYP27B1 (rs10877012 G > T), DHCR7 (rs7944926 G > A, rs3829251 G > A), GC (rs3755967) and CYP2R1 (rs10741657 G > A, rs2060793 G > A)] on susceptibility to Chlamydia infections in humans. 26867646 2016
dbSNP: rs10877012
rs10877012
Entrez Id: 1594;4234
Gene Symbol: CYP27B1;METTL1
CYP27B1;METTL1
CUI: C1337013
Disease:
Differentiated Thyroid Gland Carcinoma
0.010 GeneticVariation BEFREE German patients (n=253) with DTC (papillary thyroid carcinoma [PTC] and follicular thyroid carcinoma [FTC]) and HC (n=302) were genotyped for polymorphisms within the vitamin D metabolizing enzymes such as 25-hydroxylase (CYP2R1[rs12794714, rs10741657]), 25-hydroxyvitamin D-1α-hydroxylase (CYP27B1[rs10877012, rs4646536]), and 25-hydroxyvitamin D 24-hydrolase (CYP24A1[rs927650, rs2248137, rs2296241]). 22690899 2012
dbSNP: rs10877012
rs10877012
Entrez Id: 1594;4234
Gene Symbol: CYP27B1;METTL1
CYP27B1;METTL1
CUI: C0004096
Disease:
Asthma
0.010 GeneticVariation BEFREE We found that rs12794714 and rs10877012 SNPs were associated with asthma risk. 29502202 2018
dbSNP: rs10877012
rs10877012
Entrez Id: 1594;4234
Gene Symbol: CYP27B1;METTL1
CYP27B1;METTL1
CUI: C0206682
Disease:
Follicular thyroid carcinoma
0.010 GeneticVariation BEFREE German patients (n=253) with DTC (papillary thyroid carcinoma [PTC] and follicular thyroid carcinoma [FTC]) and HC (n=302) were genotyped for polymorphisms within the vitamin D metabolizing enzymes such as 25-hydroxylase (CYP2R1[rs12794714, rs10741657]), 25-hydroxyvitamin D-1α-hydroxylase (CYP27B1[rs10877012, rs4646536]), and 25-hydroxyvitamin D 24-hydrolase (CYP24A1[rs927650, rs2248137, rs2296241]). 22690899 2012
dbSNP: rs10877012
rs10877012
Entrez Id: 1594;4234
Gene Symbol: CYP27B1;METTL1
CYP27B1;METTL1
CUI: C0036202
Disease:
Sarcoidosis
0.010 GeneticVariation BEFREE Subjects carrying the CC genotype of <i>CYP27B1</i> rs10877012 have 10 times lower odds of suffering from sarcoidosis. 31572458 2019
dbSNP: rs118204009
rs118204009
Entrez Id: 1594
Gene Symbol: CYP27B1
CYP27B1
CUI: C0026769
Disease:
Multiple Sclerosis
0.010 GeneticVariation BEFREE Sequencing CYP27B1 failed to identify mutations known to cause loss of enzymatic activity, however genotyping of p.R389H in cases and controls identified the mutation in one multi-incident family (allele frequency=0.03%) in which the p.R389H mutation segregates with disease in five family members diagnosed with MS, thus providing additional support for CYP27B1 p.R389H in the pathogenicity of MS. 24308945 2014
dbSNP: rs1452090388
rs1452090388
Entrez Id: 1594
Gene Symbol: CYP27B1
CYP27B1
CUI: C2874303
Disease:
Pseudovitamin D deficiency
0.010 GeneticVariation BEFREE DNA sequencing of the patient suspected of pseudovitamin D deficiency revealed compound heterozygosity in the CYP27B1 gene for a (c413G>T) mutation in exon 3 (R138L) and a (c1232G>A) mutation in exon 8 (C411Y). 27364341 2016
dbSNP: rs3782130
rs3782130
Entrez Id: 1594;4234
Gene Symbol: CYP27B1;METTL1
CYP27B1;METTL1
CUI: C0007131
Disease:
Non-Small Cell Lung Carcinoma
0.010 GeneticVariation BEFREE The study suggests that some genetic polymorphisms involved in the vitamin D pathway may associate with NSCLC risk, and one of the polymorphisms (rs3782130) may affect gene expression and patient survival. 25544771 2015
dbSNP: rs3782130
rs3782130
Entrez Id: 1594;4234
Gene Symbol: CYP27B1;METTL1
CYP27B1;METTL1
CUI: C0009402
Disease:
Colorectal Carcinoma
0.010 GeneticVariation BEFREE In this study, no significant difference was observed for VDR (rs2238136), GC (rs4588), CYP2R1 (rs12794714), and CYP27B1 (rs3782130) gene variants in either genotype or allele frequencies between the cases with CRC and the controls and this lack of difference remained even after adjustment for age, BMI, sex, smoking status, NSAID use, and family history of CRC. 24568525 2014
dbSNP: rs3782130
rs3782130
Entrez Id: 1594;4234
Gene Symbol: CYP27B1;METTL1
CYP27B1;METTL1
CUI: C1306459
Disease:
Primary malignant neoplasm
0.010 GeneticVariation BEFREE There were no associations of rs4646537 and rs3782130 with overall cancer risks. 31467173 2019
dbSNP: rs3782130
rs3782130
Entrez Id: 1594;4234
Gene Symbol: CYP27B1;METTL1
CYP27B1;METTL1
CUI: C0006826
Disease:
Malignant Neoplasms
0.010 GeneticVariation BEFREE There were no associations of rs4646537 and rs3782130 with overall cancer risks. 31467173 2019
dbSNP: rs4646536
rs4646536
Entrez Id: 1594
Gene Symbol: CYP27B1
CYP27B1
CUI: C4722172
Disease:
Primary differentiated carcinoma of thyroid gland
0.010 GeneticVariation BEFREE German patients (n=253) with DTC (papillary thyroid carcinoma [PTC] and follicular thyroid carcinoma [FTC]) and HC (n=302) were genotyped for polymorphisms within the vitamin D metabolizing enzymes such as 25-hydroxylase (CYP2R1[rs12794714, rs10741657]), 25-hydroxyvitamin D-1α-hydroxylase (CYP27B1[rs10877012, rs4646536]), and 25-hydroxyvitamin D 24-hydrolase (CYP24A1[rs927650, rs2248137, rs2296241]). 22690899 2012
dbSNP: rs4646536
rs4646536
Entrez Id: 1594
Gene Symbol: CYP27B1
CYP27B1
CUI: C1510586
Disease:
Autism Spectrum Disorders
0.010 GeneticVariation BEFREE Maternal, paternal, and child DNA samples for 384 (81%) families of children with ASD and 234 (83%) families of TD children were genotyped for: TaqI, BsmI, FokI, and Cdx2 in the vitamin D receptor (VDR) gene, and CYP27B1 rs4646536, GC rs4588, and CYP2R1 rs10741657. 26073892 2015
dbSNP: rs4646536
rs4646536
Entrez Id: 1594
Gene Symbol: CYP27B1
CYP27B1
CUI: C0238463
Disease:
Papillary thyroid carcinoma
0.010 GeneticVariation BEFREE German patients (n=253) with DTC (papillary thyroid carcinoma [PTC] and follicular thyroid carcinoma [FTC]) and HC (n=302) were genotyped for polymorphisms within the vitamin D metabolizing enzymes such as 25-hydroxylase (CYP2R1[rs12794714, rs10741657]), 25-hydroxyvitamin D-1α-hydroxylase (CYP27B1[rs10877012, rs4646536]), and 25-hydroxyvitamin D 24-hydrolase (CYP24A1[rs927650, rs2248137, rs2296241]). 22690899 2012