Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs2043948
rs2043948
Entrez Id: 4053
Gene Symbol: LTBP2
LTBP2
CUI: C0002395
Disease:
Alzheimer's Disease
0.700 GeneticVariation GWASDB Common variants at MS4A4/MS4A6E, CD2AP, CD33 and EPHA1 are associated with late-onset Alzheimer's disease. 21460841 2011
dbSNP: rs699371
rs699371
Entrez Id: 4053
Gene Symbol: LTBP2
LTBP2
CUI: C0005890
Disease:
Body Height
0.700 GeneticVariation GWASCAT Genetic analyses of diverse populations improves discovery for complex traits. 31217584 2019
dbSNP: rs699371
rs699371
Entrez Id: 4053
Gene Symbol: LTBP2
LTBP2
CUI: C0005890
Disease:
Body Height
T 0.700 GeneticVariation GWASCAT Meta-analysis of genome-wide association studies of adult height in East Asians identifies 17 novel loci. 25429064 2015
dbSNP: rs862034
rs862034
Entrez Id: 4053
Gene Symbol: LTBP2
LTBP2
CUI: C0005890
Disease:
Body Height
A 0.700 GeneticVariation GWASCAT Hundreds of variants clustered in genomic loci and biological pathways affect human height. 20881960 2010
dbSNP: rs862034
rs862034
Entrez Id: 4053
Gene Symbol: LTBP2
LTBP2
CUI: C0005890
Disease:
Body Height
A 0.700 GeneticVariation GWASCAT Defining the role of common variation in the genomic and biological architecture of adult human height. 25282103 2014
dbSNP: rs862041
rs862041
Entrez Id: 4053
Gene Symbol: LTBP2
LTBP2
CUI: C0005890
Disease:
Body Height
0.700 GeneticVariation GWASCAT Leveraging Polygenic Functional Enrichment to Improve GWAS Power. 30595370 2019
dbSNP: rs862045
rs862045
Entrez Id: 4053
Gene Symbol: LTBP2
LTBP2
CUI: C0005890
Disease:
Body Height
0.700 GeneticVariation GWASCAT Characterizing rare and low-frequency height-associated variants in the Japanese population. 31562340 2019
dbSNP: rs766435538
rs766435538
Entrez Id: 4053
Gene Symbol: LTBP2
LTBP2
CUI: C1862103
Disease:
Brachydactyly type C
0.010 GeneticVariation BEFREE To search for potential phenotypic modifiers regulating secretion of GDF5, we compared cells overexpressing wild type (Wt) GDF5 and GDF5 with a novel mutation in the prodomain identified in a large Pakistani family with Brachydactyly type C and mild Grebe type chondrodyslplasia (c527T>C; p.Leu176Pro). 23812741 2013
dbSNP: rs121918355
rs121918355
Entrez Id: 4053
Gene Symbol: LTBP2
LTBP2
CUI: C0000768
Disease:
Congenital Abnormality
0.010 GeneticVariation BEFREE The genetically homogeneous group of p.R299X homozygotes showed variable phenotypes (presumably also underlying pathogenetic mechanisms), wherein PCG proper with primary dysgenesis of the trabecular meshwork, and Marfan syndrome-like zonular disease with ectopia lentis and later onset secondary glaucoma are two extremes. 21081970 2011
dbSNP: rs137854855
rs137854855
Entrez Id: 4053
Gene Symbol: LTBP2
LTBP2
CUI: C0016842
Disease:
Congenital pectus excavatum
0.010 GeneticVariation BEFREE Heterozygous c.1642C >T (p.Arg548*) possibly contributed to MFS-related phenotypes, including ocular manifestations, mitral valve prolapse, and pectus excavatum, but was not cause of MFS. 22539340 2012
dbSNP: rs121918355
rs121918355
Entrez Id: 4053
Gene Symbol: LTBP2
LTBP2
CUI: C0013581
Disease:
Ectopia Lentis
0.010 GeneticVariation BEFREE The genetically homogeneous group of p.R299X homozygotes showed variable phenotypes (presumably also underlying pathogenetic mechanisms), wherein PCG proper with primary dysgenesis of the trabecular meshwork, and Marfan syndrome-like zonular disease with ectopia lentis and later onset secondary glaucoma are two extremes. 21081970 2011
dbSNP: rs137854859
rs137854859
Entrez Id: 4053
Gene Symbol: LTBP2
LTBP2
CUI: C0206368
Disease:
Exfoliation Syndrome
G 0.700 GeneticVariation CLINVAR
dbSNP: rs137854864
rs137854864
Entrez Id: 4053
Gene Symbol: LTBP2
LTBP2
CUI: C0206368
Disease:
Exfoliation Syndrome
C 0.700 GeneticVariation CLINVAR
dbSNP: rs121918355
rs121918355
Entrez Id: 4053
Gene Symbol: LTBP2
LTBP2
CUI: C2751316
Disease:
Glaucoma 3, Primary Congenital, D
A 0.700 CausalMutation CLINVAR
dbSNP: rs121918356
rs121918356
Entrez Id: 4053;101928352
Gene Symbol: LTBP2;LOC101928352
LTBP2;LOC101928352
CUI: C2751316
Disease:
Glaucoma 3, Primary Congenital, D
A 0.700 CausalMutation CLINVAR
dbSNP: rs137854895
rs137854895
Entrez Id: 4053
Gene Symbol: LTBP2
LTBP2
CUI: C2751316
Disease:
Glaucoma 3, Primary Congenital, D
A 0.700 CausalMutation CLINVAR
dbSNP: rs1566634475
rs1566634475
Entrez Id: 4053
Gene Symbol: LTBP2
LTBP2
CUI: C2751316
Disease:
Glaucoma 3, Primary Congenital, D
A 0.700 CausalMutation CLINVAR
dbSNP: rs1566635134
rs1566635134
Entrez Id: 4053
Gene Symbol: LTBP2
LTBP2
CUI: C2751316
Disease:
Glaucoma 3, Primary Congenital, D
G 0.700 CausalMutation CLINVAR
dbSNP: rs1566660365
rs1566660365
Entrez Id: 4053;101928352
Gene Symbol: LTBP2;LOC101928352
LTBP2;LOC101928352
CUI: C2751316
Disease:
Glaucoma 3, Primary Congenital, D
G 0.700 CausalMutation CLINVAR
dbSNP: rs137854895
rs137854895
Entrez Id: 4053
Gene Symbol: LTBP2
LTBP2
CUI: C2981140
Disease:
Glaucoma of childhood
A 0.700 CausalMutation CLINVAR
dbSNP: rs137854858
rs137854858
Entrez Id: 4053
Gene Symbol: LTBP2
LTBP2
CUI: C0339573
Disease:
Glaucoma, Primary Open Angle
T 0.700 GeneticVariation CLINVAR
dbSNP: rs137854860
rs137854860
Entrez Id: 4053
Gene Symbol: LTBP2
LTBP2
CUI: C0339573
Disease:
Glaucoma, Primary Open Angle
T 0.700 GeneticVariation CLINVAR
dbSNP: rs137854863
rs137854863
Entrez Id: 4053
Gene Symbol: LTBP2
LTBP2
CUI: C0339573
Disease:
Glaucoma, Primary Open Angle
C 0.700 GeneticVariation CLINVAR
dbSNP: rs862034
rs862034
Entrez Id: 4053
Gene Symbol: LTBP2
LTBP2
CUI: C0489786
Disease:
Height
A 0.700 GeneticVariation GWASDB Hundreds of variants clustered in genomic loci and biological pathways affect human height. 20881960 2010
dbSNP: rs1407030489
rs1407030489
Entrez Id: 4053
Gene Symbol: LTBP2
LTBP2
CUI: C0020302
Disease:
Hydrophthalmos
0.010 GeneticVariation BEFREE We conclude from the very low penetrance and genetic epidemiological analyses that c.1103G>A (p.R368H) is unlikely to be a disease-causing recessive mutation in congenital glaucoma as previously reported. 29556725 2019