ATM, ATM serine/threonine kinase, 472

N. diseases: 684; N. variants: 974
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs1801516
rs1801516
Entrez Id: 472
Gene Symbol: ATM
ATM
CUI: C0025202
Disease:
melanoma
0.810 GeneticVariation BEFREE Finally, rs1801516, located on the ATM gene, showed a trend towards a protective role in MM similar to the one firstly described in a GWAS study. 23537197 2013
dbSNP: rs587782292
rs587782292
Entrez Id: 472;160140
Gene Symbol: ATM;C11orf65
ATM;C11orf65
CUI: C0004135
Disease:
Ataxia Telangiectasia
0.810 GeneticVariation BEFREE The cellular phenotype of a lymphoblastoid cell line established from an AT patient (AT173) who showed classical clinical AT features, and carried two homozygous missense alterations, the 378T>A variant and 9022C>T located within the ATM kinase domain, has been characterized. 12552566 2003
dbSNP: rs28904921
rs28904921
Entrez Id: 472;160140
Gene Symbol: ATM;C11orf65
ATM;C11orf65
CUI: C0006142
Disease:
Malignant neoplasm of breast
0.780 GeneticVariation BEFREE Recent reports suggest that two ATM gene mutations, 7271T>G and IVS10-6T>G, are associated with a high risk of breast cancer among multiple-case families. 14562025 2003
dbSNP: rs28904921
rs28904921
Entrez Id: 472;160140
Gene Symbol: ATM;C11orf65
ATM;C11orf65
CUI: C0006142
Disease:
Malignant neoplasm of breast
0.780 GeneticVariation BEFREE Based on these results, we propose that all female carriers of 40-50 years of age and female ATM c.7271T>G mutation carriers from 25 years of age onwards be offered intensified surveillance programs for breast cancer. 26662178 2016
dbSNP: rs28904921
rs28904921
Entrez Id: 472;160140
Gene Symbol: ATM;C11orf65
ATM;C11orf65
CUI: C0006142
Disease:
Malignant neoplasm of breast
0.780 GeneticVariation BEFREE These findings suggest that although the more common c.1066-6T>G variant is not associated with breast cancer, the rare ATM c.7271T>G variant is associated with a substantially elevated risk. 16958054 2006
dbSNP: rs28904921
rs28904921
Entrez Id: 472;160140
Gene Symbol: ATM;C11orf65
ATM;C11orf65
CUI: C0006142
Disease:
Malignant neoplasm of breast
0.780 GeneticVariation BEFREE For European women, strong evidence of association with breast cancer risk was observed for PALB2 c.1592delT OR 3.44 (95% CI 1.39 to 8.52, p=7.1×10<sup>-5</sup>), PALB2 c.3113G>A OR 4.21 (95% CI 1.84 to 9.60, p=6.9×10<sup>-8</sup>) and ATM c.7271T>G OR 11.0 (95% CI 1.42 to 85.7, p=0.0012). 27595995 2016
dbSNP: rs28904921
rs28904921
Entrez Id: 472;160140
Gene Symbol: ATM;C11orf65
ATM;C11orf65
CUI: C0006142
Disease:
Malignant neoplasm of breast
0.780 GeneticVariation BEFREE We report, in two A-T families, an ATM mutation (7271T-->G) that may be associated with an increased risk of breast cancer in both homozygotes and heterozygotes (relative risk 12.7; P=. 9463314 1998
dbSNP: rs28904921
rs28904921
Entrez Id: 472;160140
Gene Symbol: ATM;C11orf65
ATM;C11orf65
CUI: C0006142
Disease:
Malignant neoplasm of breast
0.780 GeneticVariation BEFREE Nevertheless, two recurrent ATM mutations, T7271G and IVS10-6T-->G, reportedly increase the risk of breast cancer. 11830610 2002
dbSNP: rs28904921
rs28904921
Entrez Id: 472;160140
Gene Symbol: ATM;C11orf65
ATM;C11orf65
CUI: C0006142
Disease:
Malignant neoplasm of breast
0.780 GeneticVariation BEFREE We validated the expression differences by RT-PCR in additional heterozygous V2424G LCLs from another breast cancer family. 17001622 2006
dbSNP: rs28904921
rs28904921
Entrez Id: 472;160140
Gene Symbol: ATM;C11orf65
ATM;C11orf65
CUI: C0006142
Disease:
Malignant neoplasm of breast
0.780 GeneticVariation BEFREE We conclude that the ATM IVS10-6T-->G mutation does not confer a significantly elevated breast cancer risk and that ATM 7271T-->G is a rare event in familial breast cancer. 14871810 2004
dbSNP: rs1800057
rs1800057
Entrez Id: 472
Gene Symbol: ATM
ATM
CUI: C0600139
Disease:
Prostate carcinoma
0.730 GeneticVariation BEFREE The ATM missense variant P1054R confers an about twofold increased risk for prostate cancer in our series. 17502119 2007
dbSNP: rs1800057
rs1800057
Entrez Id: 472
Gene Symbol: ATM
ATM
CUI: C0600139
Disease:
Prostate carcinoma
0.730 GeneticVariation BEFREE A missense variant in ATM, rs1800057, associated with increased prostate cancer risk, was found exclusively in two high toxicity patients but did not reach statistical significance for association with radiosensitivity (P = 0.488). 19638463 2009
dbSNP: rs1800057
rs1800057
Entrez Id: 472
Gene Symbol: ATM
ATM
CUI: C0600139
Disease:
Prostate carcinoma
0.730 GeneticVariation BEFREE These results provide evidence that the presence of common variants in the ATM gene, may confer an altered cellular phenotype, and that the ATM 3161C>G variant might be associated with prostate cancer risk. 15280931 2004
dbSNP: rs587776551
rs587776551
Entrez Id: 472
Gene Symbol: ATM
ATM
CUI: C0004135
Disease:
Ataxia Telangiectasia
0.720 GeneticVariation BEFREE The c.3576G>A (p.K1192=) was the most common homozygous pathogenic ATM variant (33.33%) that was associated with milder phenotype of ataxia telangiectasia (AT) with the onset of age of 3. 31741144 2020
dbSNP: rs587776551
rs587776551
Entrez Id: 472
Gene Symbol: ATM
ATM
CUI: C0004135
Disease:
Ataxia Telangiectasia
0.720 GeneticVariation BEFREE Compared with 51 patients with classic A-T from the Dutch cohort, patients with <i>ATM</i> c.3576G>A had a longer survival and were less likely to develop cancer, respiratory disease or immunodeficiency. 30819809 2019
dbSNP: rs587779852
rs587779852
Entrez Id: 472;160140
Gene Symbol: ATM;C11orf65
ATM;C11orf65
CUI: C0004135
Disease:
Ataxia Telangiectasia
0.720 GeneticVariation BEFREE The Mennonite mutation, 5932 G>T, is common in Russian A-T families, and the STR haplovariants are the same in both Poland and Russia. 16266405 2005
dbSNP: rs587779852
rs587779852
Entrez Id: 472;160140
Gene Symbol: ATM;C11orf65
ATM;C11orf65
CUI: C0004135
Disease:
Ataxia Telangiectasia
0.720 GeneticVariation BEFREE We now report that a nonsense mutation, p.E1978X (c.5932G>T), is both a classical A-T mutation and a breast cancer susceptibility allele in Eastern European populations. 18807267 2009
dbSNP: rs587779815
rs587779815
Entrez Id: 472
Gene Symbol: ATM
ATM
CUI: C0004135
Disease:
Ataxia Telangiectasia
0.710 GeneticVariation BEFREE In this study, we report a founder effect of AT with two different mutations: 1339 C > T and 6672 del GG together with 6677 del TACG, found in four Israeli Druze clans originating from three different Druze centers in the Middle East (Lebanon, Syria and Jordan). 15164409 2004
dbSNP: rs587779852
rs587779852
Entrez Id: 472;160140
Gene Symbol: ATM;C11orf65
ATM;C11orf65
CUI: C0006142
Disease:
Malignant neoplasm of breast
0.710 GeneticVariation BEFREE In the combined analysis, E1978X was significantly associated with breast cancer (Mantel-Haenszel OR: 5.6, 95% CI: 1.3-21.4, P = 0.01). 18807267 2009
dbSNP: rs587782652
rs587782652
Entrez Id: 472;160140
Gene Symbol: ATM;C11orf65
ATM;C11orf65
CUI: C0004135
Disease:
Ataxia Telangiectasia
0.710 GeneticVariation BEFREE The oldest patient with A-T reported so far was a 78-year-old patient who was compound heterozygous for <i>ATM</i> c.8147T>C. 30819809 2019
dbSNP: rs770641163
rs770641163
Entrez Id: 472;160140
Gene Symbol: ATM;C11orf65
ATM;C11orf65
CUI: C0004135
Disease:
Ataxia Telangiectasia
0.710 GeneticVariation BEFREE The sibling with ataxia telangiectasia revealed a homozygous p.Arg2993Stop (c.8977C>T) null mutation in the ATM gene. 30339652 2019
dbSNP: rs1801516
rs1801516
Entrez Id: 472
Gene Symbol: ATM
ATM
CUI: C0678222
Disease:
Breast Carcinoma
0.100 GeneticVariation BEFREE Five variants were previously reported to confer risk of various malignant or benign tumors (rs78378222 in TP53, rs10069690 in TERT, rs1800057 and rs1801516 in ATM, and rs7907606 at OBFC1) and four signals are located at established risk loci for hormone-related traits (endometriosis and breast cancer) at 1q36.12 (CDC42/WNT4), 2p25.1 (GREB1), 20p12.3 (MCM8), and 6q26.2 (SYNE1/ESR1). 30194396 2018
dbSNP: rs1801516
rs1801516
Entrez Id: 472
Gene Symbol: ATM
ATM
CUI: C0678222
Disease:
Breast Carcinoma
0.100 GeneticVariation BEFREE Our results do not support association of the 5557G>A or ivs38-8T>C variant with increased breast cancer risk or with bilateral breast cancer. 16914028 2006
dbSNP: rs1801516
rs1801516
Entrez Id: 472
Gene Symbol: ATM
ATM
CUI: C0006142
Disease:
Malignant neoplasm of breast
0.100 GeneticVariation BEFREE Five variants were previously reported to confer risk of various malignant or benign tumors (rs78378222 in TP53, rs10069690 in TERT, rs1800057 and rs1801516 in ATM, and rs7907606 at OBFC1) and four signals are located at established risk loci for hormone-related traits (endometriosis and breast cancer) at 1q36.12 (CDC42/WNT4), 2p25.1 (GREB1), 20p12.3 (MCM8), and 6q26.2 (SYNE1/ESR1). 30194396 2018
dbSNP: rs1801516
rs1801516
Entrez Id: 472
Gene Symbol: ATM
ATM
CUI: C0678222
Disease:
Breast Carcinoma
0.100 GeneticVariation BEFREE These results do not support an impact of ATM rs1801516 on late skin reactions of radiotherapy for breast cancer, nevertheless further large studies are still required for conclusive evidences. 31756226 2019