PGK1, phosphoglycerate kinase 1, 5230

N. diseases: 144; N. variants: 122
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs137852538
rs137852538
Entrez Id: 5230
Gene Symbol: PGK1
PGK1
CUI: C1970848
Disease:
Phosphoglycerate Kinase 1 Deficiency
0.810 GeneticVariation BEFREE The diagnosis of PGK deficiency was made based on the remarkably low (<5% of normal) erythrocyte PGK enzyme activity level and the identification of a missense (c. 491A --> T) PGK1 gene mutation. 16740138 2006
dbSNP: rs151340632
rs151340632
Entrez Id: 538;5230
Gene Symbol: ATP7A;PGK1
ATP7A;PGK1
CUI: C0268353
Disease:
Cutis laxa, x-linked
0.810 GeneticVariation BEFREE We studied two brothers with typical occipital horn syndrome and used yeast complementation and timed growth assays, exploiting a Saccharomyces cerevisiae mutant strain, to assess in vitro N1304S copper transport. 17108763 2006
dbSNP: rs72554639
rs72554639
Entrez Id: 538;5230
Gene Symbol: ATP7A;PGK1
ATP7A;PGK1
CUI: C0022716
Disease:
Menkes Kinky Hair Syndrome
0.810 GeneticVariation BEFREE A numerical investigation into possible mechanisms by that the A629P mutant of ATP7A causes Menkes Disease. 20714486 2010
dbSNP: rs72554652
rs72554652
Entrez Id: 538;5230
Gene Symbol: ATP7A;PGK1
ATP7A;PGK1
CUI: C0022716
Disease:
Menkes Kinky Hair Syndrome
0.810 GeneticVariation BEFREE These findings identify G1019D as the first conditional mutation associated with Menkes disease and demonstrate correction of the mislocalized protein by copper supplementation. 12221109 2002
dbSNP: rs137852534
rs137852534
Entrez Id: 5230
Gene Symbol: PGK1
PGK1
CUI: C1970848
Disease:
Phosphoglycerate Kinase 1 Deficiency
0.710 GeneticVariation BEFREE An inosine monophosphate dehydrogenase 1 (IMPDH1) pseudogene carries a c.676G>A mutation that produces a p.Asp226Asn substitution that causes the retinitis pigmentosa 10 (RP10) form of adRP; and a phosphoglycerate kinase 1 (PGK1) pseudogene (PGK1P1) carries a c.837T>C mutation that produces a p.Ile252Thr substitution that is associated with a phosphoglycerate kinase deficiency. 16671097 2006
dbSNP: rs151340633
rs151340633
Entrez Id: 538;5230
Gene Symbol: ATP7A;PGK1
ATP7A;PGK1
CUI: C0022716
Disease:
Menkes Kinky Hair Syndrome
0.710 GeneticVariation BEFREE Western blotting, in vitro expression analyses, immunohistochemistry, and yeast complementation assays using cultured fibroblasts from a classic Menkes disease patient all indicated small amounts of native ATP7A(R201X) read-through and were associated with a dramatic clinical response to early copper treatment. 19194885 2009
dbSNP: rs72554646
rs72554646
Entrez Id: 538;5230
Gene Symbol: ATP7A;PGK1
ATP7A;PGK1
CUI: C0022716
Disease:
Menkes Kinky Hair Syndrome
0.710 GeneticVariation BEFREE To elucidate the molecular consequences of the ATP7A mutations, various mutations in ATP7A associated with distinct phenotypes of MD (L873R, C1000R, N1304S, and A1362D) were analyzed in detail. 21667063 2012
dbSNP: rs267606673
rs267606673
Entrez Id: 538;5230
Gene Symbol: ATP7A;PGK1
ATP7A;PGK1
CUI: C0235025
Disease:
Peripheral motor neuropathy
0.040 GeneticVariation BEFREE Recently, two unique ATP7A missense mutations, T994I and P1386S, were shown to cause isolated adult-onset distal motor neuropathy. 24754450 2014
dbSNP: rs267606673
rs267606673
Entrez Id: 538;5230
Gene Symbol: ATP7A;PGK1
ATP7A;PGK1
CUI: C0235025
Disease:
Peripheral motor neuropathy
0.040 GeneticVariation BEFREE We investigated two ATP7A motor neuropathy mutations (T994I, P1386S) previously associated with abnormal intracellular trafficking. 22210628 2012
dbSNP: rs267606673
rs267606673
Entrez Id: 538;5230
Gene Symbol: ATP7A;PGK1
ATP7A;PGK1
CUI: C0235025
Disease:
Peripheral motor neuropathy
0.040 GeneticVariation BEFREE We have generated an Atp7a conditional knock in mouse model of dHMNX expressing Atp7a(T985I), the orthologue of the human ATP7A(T994I) identified in dHMNX patients. 27293072 2016
dbSNP: rs267606673
rs267606673
Entrez Id: 538;5230
Gene Symbol: ATP7A;PGK1
ATP7A;PGK1
CUI: C0235025
Disease:
Peripheral motor neuropathy
0.040 GeneticVariation BEFREE We identified two unique ATP7A missense mutations (p.P1386S and p.T994I) in males with distal motor neuropathy in two families. 20170900 2010
dbSNP: rs267606672
rs267606672
Entrez Id: 538;5230
Gene Symbol: ATP7A;PGK1
ATP7A;PGK1
CUI: C0235025
Disease:
Peripheral motor neuropathy
0.030 GeneticVariation BEFREE We previously identified two rare ATP7A missense mutations (P1386S and T994I) leading to a non-fatal form of motor neuron disorder, X-linked distal hereditary motor neuropathy (dHMNX), without overt signs of systemic Cu deficiency. 27293072 2016
dbSNP: rs267606672
rs267606672
Entrez Id: 538;5230
Gene Symbol: ATP7A;PGK1
ATP7A;PGK1
CUI: C0235025
Disease:
Peripheral motor neuropathy
0.030 GeneticVariation BEFREE We identified two unique ATP7A missense mutations (p.P1386S and p.T994I) in males with distal motor neuropathy in two families. 20170900 2010
dbSNP: rs267606672
rs267606672
Entrez Id: 538;5230
Gene Symbol: ATP7A;PGK1
ATP7A;PGK1
CUI: C0235025
Disease:
Peripheral motor neuropathy
0.030 GeneticVariation BEFREE Recently, two unique ATP7A missense mutations, T994I and P1386S, were shown to cause isolated adult-onset distal motor neuropathy. 24754450 2014
dbSNP: rs137852539
rs137852539
Entrez Id: 5230
Gene Symbol: PGK1
PGK1
CUI: C0026848
Disease:
Myopathy
0.020 GeneticVariation BEFREE Phosphoglycerate kinase (PGK) activity was markedly decreased in muscle, and molecular analysis of the PGK1 gene identified the p.T378P mutation that was recently reported in a patient with isolated myopathy. 20151463 2010
dbSNP: rs137852539
rs137852539
Entrez Id: 5230
Gene Symbol: PGK1
PGK1
CUI: C0026848
Disease:
Myopathy
0.020 GeneticVariation BEFREE Variants highly perturbed in both catalytic efficiency (p.G158V, p.D164V, p.K191del, D285V, p.D315N, and p.T378P) and heat stability (all, but p.T378P) result to be mainly associated with myopathy alone. 22348148 2012
dbSNP: rs137852534
rs137852534
Entrez Id: 5230
Gene Symbol: PGK1
PGK1
CUI: C0684324
Disease:
Deficiency of phosphoglycerate kinase
0.010 GeneticVariation BEFREE An inosine monophosphate dehydrogenase 1 (IMPDH1) pseudogene carries a c.676G>A mutation that produces a p.Asp226Asn substitution that causes the retinitis pigmentosa 10 (RP10) form of adRP; and a phosphoglycerate kinase 1 (PGK1) pseudogene (PGK1P1) carries a c.837T>C mutation that produces a p.Ile252Thr substitution that is associated with a phosphoglycerate kinase deficiency. 16671097 2006
dbSNP: rs137852534
rs137852534
Entrez Id: 5230
Gene Symbol: PGK1
PGK1
CUI: C1867299
Disease:
Retinitis Pigmentosa 10
0.010 GeneticVariation BEFREE An inosine monophosphate dehydrogenase 1 (IMPDH1) pseudogene carries a c.676G>A mutation that produces a p.Asp226Asn substitution that causes the retinitis pigmentosa 10 (RP10) form of adRP; and a phosphoglycerate kinase 1 (PGK1) pseudogene (PGK1P1) carries a c.837T>C mutation that produces a p.Ile252Thr substitution that is associated with a phosphoglycerate kinase deficiency. 16671097 2006
dbSNP: rs137852534
rs137852534
Entrez Id: 5230
Gene Symbol: PGK1
PGK1
CUI: C0339525
Disease:
Autosomal dominant retinitis pigmentosa
0.010 GeneticVariation BEFREE An inosine monophosphate dehydrogenase 1 (IMPDH1) pseudogene carries a c.676G>A mutation that produces a p.Asp226Asn substitution that causes the retinitis pigmentosa 10 (RP10) form of adRP; and a phosphoglycerate kinase 1 (PGK1) pseudogene (PGK1P1) carries a c.837T>C mutation that produces a p.Ile252Thr substitution that is associated with a phosphoglycerate kinase deficiency. 16671097 2006
dbSNP: rs137852538
rs137852538
Entrez Id: 5230
Gene Symbol: PGK1
PGK1
CUI: C0684324
Disease:
Deficiency of phosphoglycerate kinase
0.010 GeneticVariation BEFREE The diagnosis of PGK deficiency was made based on the remarkably low (<5% of normal) erythrocyte PGK enzyme activity level and the identification of a missense (c. 491A --> T) PGK1 gene mutation. 16740138 2006
dbSNP: rs137852538
rs137852538
Entrez Id: 5230
Gene Symbol: PGK1
PGK1
CUI: C0242422
Disease:
Parkinsonian Disorders
0.010 GeneticVariation BEFREE To investigate the nigrostriatal system using 99mTc-TRODAT-1 SPECT binding and report the phenotype of three affected males with early onset levodopa responsive Parkinsonism harbouring the c.491 A > T/p.D164V pathogenic variant. 30975619 2019
dbSNP: rs138178131
rs138178131
Entrez Id: 538;5230;441531
Gene Symbol: ATP7A;PGK1;PGAM4
ATP7A;PGK1;PGAM4
CUI: C4021107
Disease:
Non-obstructive azoospermia
0.010 GeneticVariation BEFREE PGAM4 coding region mutations were not observed and the G75C polymorphism is not associated with NOA susceptibility among the Chinese Han population. 23631659 2013
dbSNP: rs267606673
rs267606673
Entrez Id: 538;5230
Gene Symbol: ATP7A;PGK1
ATP7A;PGK1
CUI: C0085084
Disease:
Motor Neuron Disease
0.010 GeneticVariation BEFREE Immunoprecipitation assays revealed abnormal interaction between ATP7A(T994I) and p97/VCP, a protein mutated in two autosomal dominant forms of motor neuron disease. 24754450 2014
dbSNP: rs267606673
rs267606673
Entrez Id: 538;5230
Gene Symbol: ATP7A;PGK1
ATP7A;PGK1
CUI: C0011265
Disease:
Presenile dementia
0.010 GeneticVariation BEFREE Immunoprecipitation assays revealed an abnormal interaction between ATP7A(T994I) and p97/VCP, an ubiquitin-selective chaperone which is mutated in two autosomal dominant forms of motor neuron disease: amyotrophic lateral sclerosis and inclusion body myopathy with early-onset Paget disease and fronto-temporal dementia. 22210628 2012
dbSNP: rs267606673
rs267606673
Entrez Id: 538;5230
Gene Symbol: ATP7A;PGK1
ATP7A;PGK1
CUI: C0026848
Disease:
Myopathy
0.010 GeneticVariation BEFREE Immunoprecipitation assays revealed an abnormal interaction between ATP7A(T994I) and p97/VCP, an ubiquitin-selective chaperone which is mutated in two autosomal dominant forms of motor neuron disease: amyotrophic lateral sclerosis and inclusion body myopathy with early-onset Paget disease and fronto-temporal dementia. 22210628 2012