SLC10A1, solute carrier family 10 member 1, 6554

N. diseases: 54; N. variants: 7
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs2296651
rs2296651
Entrez Id: 6554
Gene Symbol: SLC10A1
SLC10A1
CUI: C0019163
Disease:
Hepatitis B
0.100 GeneticVariation BEFREE These findings suggest that the rs2296651 polymorphism may predispose the susceptibility to and chronicity of HBV infection. 24735529 2014
dbSNP: rs2296651
rs2296651
Entrez Id: 6554
Gene Symbol: SLC10A1
SLC10A1
CUI: C0011226
Disease:
Hepatitis D Infection
0.020 GeneticVariation BEFREE The mutation S267F, corresponding to a single nucleotide polymorphism (SNP) found in about 9% of the East Asian population, renders NTCP without either taurocholate transporting activity or the ability to support HBV or HDV infection in cell culture. 24390325 2014
dbSNP: rs4646287
rs4646287
Entrez Id: 6554
Gene Symbol: SLC10A1
SLC10A1
CUI: C2239176
Disease:
Liver carcinoma
0.020 GeneticVariation BEFREE The rs7154439 AA genotype was associated with HBV clearance, while the rs4646287 AA genotype was associated with HCC occurrence. 25010264 2014
dbSNP: rs7154439
rs7154439
Entrez Id: 6554
Gene Symbol: SLC10A1
SLC10A1
CUI: C0019163
Disease:
Hepatitis B
0.010 GeneticVariation BEFREE The rs7154439 AA genotype was associated with HBV clearance, while the rs4646287 AA genotype was associated with HCC occurrence. 25010264 2014
dbSNP: rs7154439
rs7154439
Entrez Id: 6554
Gene Symbol: SLC10A1
SLC10A1
CUI: C2239176
Disease:
Liver carcinoma
0.010 GeneticVariation BEFREE The rs7154439 AA genotype was associated with HBV clearance, while the rs4646287 AA genotype was associated with HCC occurrence. 25010264 2014
dbSNP: rs2296651
rs2296651
Entrez Id: 6554
Gene Symbol: SLC10A1
SLC10A1
CUI: C0019163
Disease:
Hepatitis B
0.100 GeneticVariation BEFREE The p.Ser267Phe variant was associated with healthy status (P = 5.7 × 10(-23) , odds ratio = 0.36) irrespective of hepatitis B virus surface antibody status (P = 6.2 × 10(-21) and 1.5 × 10(-10) , respectively, when the cases were compared with hepatitis B virus surface antibody-positive and -negative controls). 25418280 2015
dbSNP: rs2296651
rs2296651
Entrez Id: 6554
Gene Symbol: SLC10A1
SLC10A1
CUI: C0524909
Disease:
Hepatitis B, Chronic
0.060 GeneticVariation BEFREE The p.Ser267Phe NTCP variant is significantly associated with resistance to chronic hepatitis B and a lower incidence of acute-on-chronic liver failure. 25418280 2015
dbSNP: rs2296651
rs2296651
Entrez Id: 6554
Gene Symbol: SLC10A1
SLC10A1
CUI: C3850141
Disease:
Acute-On-Chronic Liver Failure
0.010 GeneticVariation BEFREE The p.Ser267Phe NTCP variant is significantly associated with resistance to chronic hepatitis B and a lower incidence of acute-on-chronic liver failure. 25418280 2015
dbSNP: rs2296651
rs2296651
Entrez Id: 6554
Gene Symbol: SLC10A1
SLC10A1
CUI: C2239176
Disease:
Liver carcinoma
0.070 GeneticVariation BEFREE Together with serum HBV DNA levels, S267F may help to identify patients with CHB with very low risk of HCC. 26642861 2016
dbSNP: rs2296651
rs2296651
Entrez Id: 6554
Gene Symbol: SLC10A1
SLC10A1
CUI: C0524909
Disease:
Hepatitis B, Chronic
0.060 GeneticVariation BEFREE The rs2296651 (S267F) variant on NTCP (SLC10A1) is inversely associated with chronic hepatitis B and progression to cirrhosis and hepatocellular carcinoma in patients with chronic hepatitis B. 26642861 2016
dbSNP: rs2296651
rs2296651
Entrez Id: 6554
Gene Symbol: SLC10A1
SLC10A1
CUI: C0023890
Disease:
Liver Cirrhosis
0.050 GeneticVariation BEFREE The SLC10A1 (NTCP) S267F variant is independently associated with decreased risk of cirrhosis and HCC, and resistance to CHB infection. 26642861 2016
dbSNP: rs2296651
rs2296651
Entrez Id: 6554
Gene Symbol: SLC10A1
SLC10A1
CUI: C1623038
Disease:
Cirrhosis
0.040 GeneticVariation BEFREE The SLC10A1 (NTCP) S267F variant is independently associated with decreased risk of cirrhosis and HCC, and resistance to CHB infection. 26642861 2016
dbSNP: rs2296651
rs2296651
Entrez Id: 6554
Gene Symbol: SLC10A1
SLC10A1
CUI: C0151517
Disease:
Complete atrioventricular block
0.040 GeneticVariation BEFREE Together with serum HBV DNA levels, S267F may help to identify patients with CHB with very low risk of HCC. 26642861 2016
dbSNP: rs4646287
rs4646287
Entrez Id: 6554
Gene Symbol: SLC10A1
SLC10A1
CUI: C2239176
Disease:
Liver carcinoma
0.020 GeneticVariation BEFREE Of the five SNPs validated in all 3650 subjects, the T allele of rs4646287 was significantly decreased (p = 0.002) in the PS group (10.1%) and PSE group (8.1%) compared to the controls (10.9%) and was decreased to 7.4% in the PSE hepatocellular carcinoma (HCC) subgroup. 26968990 2016
dbSNP: rs4646287
rs4646287
Entrez Id: 6554
Gene Symbol: SLC10A1
SLC10A1
CUI: C0019163
Disease:
Hepatitis B
0.010 GeneticVariation BEFREE We found a genetic variant (rs4646287) located in intron 1 of NTCP that may be associated with increased risk of HBV infection in Han Chinese. 26968990 2016
dbSNP: rs2296651
rs2296651
Entrez Id: 6554
Gene Symbol: SLC10A1
SLC10A1
CUI: C0019163
Disease:
Hepatitis B
0.100 GeneticVariation BEFREE In conclusion, the S267F variant of NTCP is clinically associated with a lower risk of chronic HBV infection and cirrhosis development, which implicates suppressing HBV entry could reduce the disease burden. 29247233 2017
dbSNP: rs2296651
rs2296651
Entrez Id: 6554
Gene Symbol: SLC10A1
SLC10A1
CUI: C0019163
Disease:
Hepatitis B
0.100 GeneticVariation BEFREE The role of SLC10A1 polymorphisms, particularly the Ser267Phe variant (rs2296651) in exon 4, has been frequently investigated in regard to risk of persistent HBV infection. 28429786 2017
dbSNP: rs2296651
rs2296651
Entrez Id: 6554
Gene Symbol: SLC10A1
SLC10A1
CUI: C0019163
Disease:
Hepatitis B
0.100 GeneticVariation BEFREE The S267F variant is absent among Moroccans regardless of chronic HBV infection status. 28125961 2017
dbSNP: rs2296651
rs2296651
Entrez Id: 6554
Gene Symbol: SLC10A1
SLC10A1
CUI: C0019163
Disease:
Hepatitis B
0.100 GeneticVariation BEFREE Meta-analysis also showed that NTCP rs2296651-GA was inversely associated with HBV infection [OR(95%CI)=0.532(0.287-0.986), <i>p</i>=0.028, codominant] or HBV-related HCC [OR(95%CI)=0.701(0.564-0.872), <i>p</i>=0.001, recessive]. 29285260 2017
dbSNP: rs2296651
rs2296651
Entrez Id: 6554
Gene Symbol: SLC10A1
SLC10A1
CUI: C2239176
Disease:
Liver carcinoma
0.070 GeneticVariation BEFREE Meta-analysis also showed that NTCP rs2296651-GA was inversely associated with HBV infection [OR(95%CI)=0.532(0.287-0.986), <i>p</i>=0.028, codominant] or HBV-related HCC [OR(95%CI)=0.701(0.564-0.872), <i>p</i>=0.001, recessive]. 29285260 2017
dbSNP: rs2296651
rs2296651
Entrez Id: 6554
Gene Symbol: SLC10A1
SLC10A1
CUI: C2239176
Disease:
Liver carcinoma
0.070 GeneticVariation BEFREE The frequency of the S267F variant in CHB, cirrhosis and hepatocellular carcinoma (HCC) patients was 3.3%, 0.9%, and 3.5%, respectively. 29247233 2017
dbSNP: rs2296651
rs2296651
Entrez Id: 6554
Gene Symbol: SLC10A1
SLC10A1
CUI: C0524909
Disease:
Hepatitis B, Chronic
0.060 GeneticVariation BEFREE In this study, we aimed to evaluate the prevalence of S267F polymorphism in Korean patients with chronic hepatitis B (CHB) and its association with disease progression and potential viral evolution in the preS1 domain of HBV. 29247233 2017
dbSNP: rs2296651
rs2296651
Entrez Id: 6554
Gene Symbol: SLC10A1
SLC10A1
CUI: C0023890
Disease:
Liver Cirrhosis
0.050 GeneticVariation BEFREE Thus, the S267F variant correlated significantly with a lower risk for cirrhosis (P = 0.036). 29247233 2017
dbSNP: rs2296651
rs2296651
Entrez Id: 6554
Gene Symbol: SLC10A1
SLC10A1
CUI: C0151517
Disease:
Complete atrioventricular block
0.040 GeneticVariation BEFREE The frequency of the S267F variant in CHB, cirrhosis and hepatocellular carcinoma (HCC) patients was 3.3%, 0.9%, and 3.5%, respectively. 29247233 2017
dbSNP: rs2296651
rs2296651
Entrez Id: 6554
Gene Symbol: SLC10A1
SLC10A1
CUI: C0151517
Disease:
Complete atrioventricular block
0.040 GeneticVariation BEFREE The frequency of rs2296651-GA was inversely correlated with CHB, LC or HCC patients [adjusted OR(95%CI)=0.16(0.11-0.23), <i>p</i><0.001; 0.34(0.21-0.55), <i>p</i>=0.001; or 0.46(0.25-0.83), <i>p</i>=0.008], respectively, compared with HCs. 29285260 2017