DisGeNET - a database of gene-disease associations

Source: GWASCAT

Variants associated to the Disease: High density lipoprotein measurement ×

Variants associated to the Gene: GALNT2 ×

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs10127775	GALNT2			1	230160042	intron variant	A/G;T	snv			4
rs10864728	GALNT2			1	230169168	intron variant	A/G	snv		0.50	3
rs10489615	GALNT2			1	230169242	intron variant	A/C;G	snv			2
rs1321257	GALNT2			1	230169566	intron variant	G/A	snv		0.50	2
rs2144300	GALNT2	0.882	0.040	1	230159169	intron variant	C/T	snv		0.44	2
rs4846914	GALNT2	0.925	0.080	1	230159944	intron variant	G/A	snv		0.45	2
rs4846923	GALNT2			1	230171476	intron variant	T/G	snv		0.72	2
rs17315646	GALNT2			1	230159560	intron variant	C/A;G	snv		0.45	1
rs2281719	GALNT2	1.000	0.040	1	230161913	intron variant	C/T	snv		0.45	1