DisGeNET - a database of gene-disease associations

Source: GWASCAT

Variants associated to the Disease: Breast Carcinoma ×

Variants associated to the Gene: FGFR2 ×

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs11200014	FGFR2	0.695	0.280	10	121575416	intron variant	G/A;T	snv		0.34	17
rs2981575	FGFR2	0.882	0.120	10	121586602	intron variant	G/A	snv		0.54	3
rs2981579	FGFR2	0.776	0.280	10	121577821	intron variant	A/G	snv		0.53	2
rs3135718	FGFR2	0.882	0.160	10	121594355	intron variant	C/T	snv		0.54	2
rs3135724	FGFR2	1.000	0.080	10	121592706	intron variant	C/G;T	snv			2
rs10510097	FGFR2	1.000	0.080	10	121568362	intron variant	C/T	snv		0.19	1
rs1219648	FGFR2	0.716	0.320	10	121586676	intron variant	A/G;T	snv			1
rs2420946	FGFR2	0.851	0.160	10	121591810	intron variant	T/C	snv		0.56	1
rs2912774	FGFR2	0.925	0.080	10	121589148	intron variant	T/A;G	snv			1
rs2981578	FGFR2	0.925	0.080	10	121580797	intron variant	C/A;T	snv			1
rs2981582	FGFR2	0.695	0.360	10	121592803	intron variant	A/G	snv		0.58	1
rs35054928	FGFR2	0.851	0.080	10	121580918	intron variant	C/-	delins			1
rs3750817	FGFR2	0.851	0.080	10	121573063	intron variant	C/G;T	snv			1
rs45631563	FGFR2	1.000	0.080	10	121589810	intron variant	A/T	snv		3.6E-02	1