Source: BEFREE

Gene Disease Score gda Association Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 673
Gene Symbol: BRAF
BRAF
CUI: C0001430
Disease: Adenoma
Adenoma
0.100 GeneticVariation BEFREE TSAs were classified into two phenotypes according to their molecular characteristics: microvesicular serrated subtypes with BRAF mutations (SA-1 and -2 lesions) and subtypes containing tubulo-serrated/conventional adenoma with K/NRAS mutations (SA-3 and -4 lesions). 31833094

2019

Entrez Id: 673
Gene Symbol: BRAF
BRAF
CUI: C0001430
Disease: Adenoma
Adenoma
0.100 GeneticVariation BEFREE Systematic review and meta-analysis was performed by searching electronic databases from January 2011 to January 2019 for studies assessing the association of BRAF-V600E mutation with clinical or pathological features of serrated adenomas. 30815911

2019

Entrez Id: 673
Gene Symbol: BRAF
BRAF
CUI: C0001430
Disease: Adenoma
Adenoma
0.100 GeneticVariation BEFREE However, unlike the conventional pathway, truncating APC mutations were rare in the serrated pathway lesions especially sessile serrated adenomas even when dysplastic (15%) and in the BRAF mutant cancers with microsatellite instability that arise from them (8%). 29148535

2018

Entrez Id: 673
Gene Symbol: BRAF
BRAF
CUI: C0001430
Disease: Adenoma
Adenoma
0.100 Biomarker BEFREE Alcohol intake is associated with an increased risk of KRAS+ and BRAF-/KRAS- tumors originating via specific molecular pathways including the traditional adenoma-carcinoma pathway but not with BRAF+ tumors originating via the serrated pathway. 27943267

2017

Entrez Id: 673
Gene Symbol: BRAF
BRAF
CUI: C0001430
Disease: Adenoma
Adenoma
0.100 GeneticVariation BEFREE Hierarchical clustering isolated three relevant clusters: (i) cluster of microsatellite stable mucinous adenocarcinomas (54%) with KRAS mutation, and frequent MGMT changes, more frequently located in the left colon, often associated with contiguous precursor adenoma; (ii) cluster of BRAF-mutated mucinous adenocarcinomas (28%) with either microsatellite instability-high or microsatellite stable status, occurring in elderly female patients, nearly all located in the right colon, having the signature of serrated pathway of carcinomas; and (iii) a heterogeneous cluster of microsatellite instability-high mucinous carcinomas (18%), including inherited colorectal carcinomas, displaying a high-grade histological pattern. 28429715

2017

Entrez Id: 673
Gene Symbol: BRAF
BRAF
CUI: C0001430
Disease: Adenoma
Adenoma
0.100 GeneticVariation BEFREE In one out of four serrated polyposis families, we identified a germline RNF43 mutation that displayed autosomal dominant cosegregation with the serrated polyposis phenotype, along with second-hit inactivation through loss of heterozygosity or somatic mutations in all serrated polyps (16), adenomas (5) and cancer (1) examined, as well as coincidental BRAF mutation in 62.5% of the serrated polyps. 27329244

2017

Entrez Id: 673
Gene Symbol: BRAF
BRAF
CUI: C0001430
Disease: Adenoma
Adenoma
0.100 GeneticVariation BEFREE Based on the current knowledge, the sessile serrated adenoma/polyp may be the major precursor of MLH1-methylated CIMP-H CRCs, whereas MLH1-unmethylated CIMP-H CRCs may develop predominantly from KRAS-mutated traditional serrated adenomas and less commonly from BRAF-mutated traditional serrated adenomas and/or sessile serrated adenomas/polyps. 26883113

2016

Entrez Id: 673
Gene Symbol: BRAF
BRAF
CUI: C0001430
Disease: Adenoma
Adenoma
0.100 Biomarker BEFREE Mutant BRAF may, in part, drive the histologic progression of adenomas toward serrated histology. 26910894

2016

Entrez Id: 673
Gene Symbol: BRAF
BRAF
CUI: C0001430
Disease: Adenoma
Adenoma
0.100 GeneticVariation BEFREE RNF43 mutation was found in 2 of 20 (10%) sessile serrated adenomas, 10 of 36 (28%) traditional serrated adenomas, 7 of 37 (19%) traditional serrated adenomas with cytologic dysplasia, and 9 of 31 (29%) BRAF-mutated/microsatellite-stable colorectal carcinomas; however, no mutation was found in 30 tubulovillous/villous adenomas. 27305845

2016

Entrez Id: 673
Gene Symbol: BRAF
BRAF
CUI: C0001430
Disease: Adenoma
Adenoma
0.100 GeneticVariation BEFREE The aim of this study was to investigate BRAF mutation and DNA methylation in colorectal serrated polyps and the right colon.Between 2005 and 2013, 146 colon polyps (47 tubular adenomas [TAs], 53 traditional serrated adenomas [TSAs], 17 sessile serrated adenomas/polyps [SSAs], and 29 hyperplastic polyps in the proximal colon [PHPs]) were collected from patients. 27930579

2016

Entrez Id: 673
Gene Symbol: BRAF
BRAF
CUI: C0001430
Disease: Adenoma
Adenoma
0.100 GeneticVariation BEFREE In conclusion, our results indicate that MLH1-hypermethylated BRAF wild-type colorectal carcinomas can harbor KRAS mutations and arise from precursor polyps resembling conventional tubular/tubulovillous adenomas. 27438990

2016

Entrez Id: 673
Gene Symbol: BRAF
BRAF
CUI: C0001430
Disease: Adenoma
Adenoma
0.100 GeneticVariation BEFREE Cancer (214 BRAF mutant, 122 BRAF wild type) and polyp (59 serrated polyps, 40 conventional adenomas) cohorts were analysed for PRDM5 promoter methylation using MethyLight technology. 25613750

2015

Entrez Id: 673
Gene Symbol: BRAF
BRAF
CUI: C0001430
Disease: Adenoma
Adenoma
0.100 GeneticVariation BEFREE BRAF mutation was more frequent, whereas KRAS mutation was less frequent in the SSA/P series as compared with the adenoma series. 24925057

2015

Entrez Id: 673
Gene Symbol: BRAF
BRAF
CUI: C0001430
Disease: Adenoma
Adenoma
0.100 GeneticVariation BEFREE The BRAF V600E mutation is one of the most frequent molecular abnormalities identified in hyperplastic polyps and sessile serrated adenomas. 26030242

2015

Entrez Id: 673
Gene Symbol: BRAF
BRAF
CUI: C0001430
Disease: Adenoma
Adenoma
0.100 GeneticVariation BEFREE Additionally, we found that the histological features of preexisting adenoma were associated with the absence of BRAF mutations, in contrast to KRAS (P < 0.05). 26681025

2015

Entrez Id: 673
Gene Symbol: BRAF
BRAF
CUI: C0001430
Disease: Adenoma
Adenoma
0.100 GeneticVariation BEFREE P16 staining was lost in the advanced areas of 55% of BRAF mutant traditional serrated adenomas compared with 10% of the advanced areas of KRAS mutant or BRAF/KRAS wild-type traditional serrated adenomas. 25216220

2015

Entrez Id: 673
Gene Symbol: BRAF
BRAF
CUI: C0001430
Disease: Adenoma
Adenoma
0.100 GeneticVariation BEFREE We investigated 194 serrated lesions of the colon, comprising 42 sessile serrated adenomas/polyps, 16 traditional serrated adenomas, 136 hyperplastic polyps and 20 tubular/tubulovillous adenomas (conventional adenomas) with the novel BRAF V600E mutation-specific antibody VE1. 23887306

2014

Entrez Id: 673
Gene Symbol: BRAF
BRAF
CUI: C0001430
Disease: Adenoma
Adenoma
0.100 GeneticVariation BEFREE Synchronous colorectal cancer (HR 1.82; 95% CI 1.15-2.87; P=0.01), synchronous advanced adenoma (HR 1.81; 95% CI 1.27-2.58; P=0.001), and BRAF(c.1799T>A) mutation (HR 2.16; 95% CI 1.25-3.73; P=0.01) were stage-independent predictors of death from MSS CRC. 24434431

2014

Entrez Id: 673
Gene Symbol: BRAF
BRAF
CUI: C0001430
Disease: Adenoma
Adenoma
0.100 GeneticVariation BEFREE We evaluated miR-31 expression, BRAF mutation and epigenetic features including CIMP status in 381 serrated lesions and 222 non-serrated adenomas and examined associations between them and tumor location (rectum; sigmoid, descending, transverse and ascending colon and cecum). 24752710

2014

Entrez Id: 673
Gene Symbol: BRAF
BRAF
CUI: C0001430
Disease: Adenoma
Adenoma
0.100 Biomarker BEFREE We conclude that hypermethylation of MLH1, when occurs in an adenoma cell with BRAF oncogenic mutational activation, drives the pathway for MSI cancer by providing the cells with a mutator phenotype. 24964857

2014

Entrez Id: 673
Gene Symbol: BRAF
BRAF
CUI: C0001430
Disease: Adenoma
Adenoma
0.100 GeneticVariation BEFREE We analyzed immunoreactivity of these proteins, methylation of PTCH and EphB2, and mutation of BRAF and Kras in sessile SAs (SSAs; n = 32), traditional SAs (n = 28), hyperplastic polyps (HPs; n = 24), and conventional adenomas (ADs; n = 21). 24612059

2014

Entrez Id: 673
Gene Symbol: BRAF
BRAF
CUI: C0001430
Disease: Adenoma
Adenoma
0.100 GeneticVariation BEFREE BRAF mutations were found in 9 (8.7%) precursor lesions, mainly associated with serrated polyps and absent in adenomas (P<0.001). 25050586

2014

Entrez Id: 673
Gene Symbol: BRAF
BRAF
CUI: C0001430
Disease: Adenoma
Adenoma
0.100 GeneticVariation BEFREE Mixed effects models revealed that mutations in APC, BRAF and KRAS occur at the transition from normal to adenoma stages whilst the hypermethylation of the Wnt antagonists continued to accumulate during the transitions from adenoma to carcinoma stages. 25432628

2014

Entrez Id: 673
Gene Symbol: BRAF
BRAF
CUI: C0001430
Disease: Adenoma
Adenoma
0.100 Biomarker BEFREE Here we describe a new mouse model for lung tumor development to investigate the role of B-RAF in oncogenic C-RAF-mediated adenoma initiation and growth. 25096573

2014

Entrez Id: 673
Gene Symbol: BRAF
BRAF
CUI: C0001430
Disease: Adenoma
Adenoma
0.100 GeneticVariation BEFREE In colorectal carcinogenesis, accumulation of high levels of methylation in combination with BRAF mutation is characteristic of the serrated pathway, but not of the adenoma-carcinoma sequence through conventional adenoma. 24962701

2014