Source: GWASDB

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs1456896
rs1456896 		0.882 0.200 7 50264865 upstream gene variant C/T snv 0.67
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.800 1.000 2 2008 2017
dbSNP: rs17221417
rs17221417
NOD2
0.925 0.040 16 50705671 intron variant C/G snv 0.20
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.810 1.000 2 2007 2017
dbSNP: rs17234657
rs17234657 		0.882 0.120 5 40401407 intergenic variant T/G snv 0.14
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.810 1.000 2 2007 2010
dbSNP: rs17309827
rs17309827
SLC22A23
1.000 0.040 6 3433084 intron variant T/G snv 0.30
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.800 1.000 2 2008 2010
dbSNP: rs1736020
rs1736020
LOC101927745
1.000 0.040 21 15440233 intron variant C/A snv 0.33
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.800 1.000 2 2008 2010
dbSNP: rs2024092
rs2024092
SBNO2
0.827 0.120 19 1124032 intron variant G/A snv 0.24 0.26
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.800 1.000 2 2008 2017
dbSNP: rs2066844
rs2066844
NOD2
0.587 0.520 16 50712015 missense variant C/T snv 2.6E-02 2.9E-02
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		1.000 0.940 2 2001 2018
dbSNP: rs2188962
rs2188962
IRF1-AS1
0.882 0.160 5 132435113 intron variant C/T snv 0.29
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.810 1.000 2 2008 2017
dbSNP: rs2201841
rs2201841
IL23R ; C1orf141
0.716 0.440 1 67228519 intron variant A/G;T snv
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.850 1.000 2 2006 2013
dbSNP: rs2301436
rs2301436
FGFR1OP
0.752 0.320 6 167024500 intron variant C/T snv 0.42
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.810 1.000 2 2008 2016
dbSNP: rs2476601
rs2476601
PTPN22 ; AP4B1-AS1
0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.860 0.800 2 2005 2016
dbSNP: rs2858331
rs2858331 		0.827 0.240 6 32713500 upstream gene variant A/G snv 0.42
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.700 1.000 2 2008 2013
dbSNP: rs2872507
rs2872507 		0.752 0.360 17 39884510 intergenic variant G/A;T snv
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.820 1.000 2 2008 2016
dbSNP: rs3197999
rs3197999
APEH ; MST1
0.732 0.280 3 49684099 missense variant G/A snv 0.26 0.27
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.830 1.000 2 2008 2017
dbSNP: rs3792109
rs3792109
ATG16L1 ; SCARNA5
1.000 0.040 2 233275771 non coding transcript exon variant G/A snv 0.45 0.42
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.800 1.000 2 2010 2013
dbSNP: rs3810936
rs3810936
TNFSF15
0.742 0.320 9 114790605 synonymous variant T/C snv 0.71 0.75
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.850 1.000 2 2005 2018
dbSNP: rs4613763
rs4613763 		0.851 0.240 5 40392626 regulatory region variant T/C snv 0.14
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.800 1.000 2 2007 2008
dbSNP: rs5743289
rs5743289
NOD2
1.000 0.040 16 50722863 intron variant C/G;T snv
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.810 1.000 2 2007 2014
dbSNP: rs6478106
rs6478106 		0.925 0.080 9 114783386 downstream gene variant C/T snv 0.34
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.820 1.000 2 2005 2019
dbSNP: rs6478108
rs6478108
TNFSF15
0.763 0.200 9 114796423 intron variant C/T snv 0.73
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.760 1.000 2 2005 2018
dbSNP: rs6651252
rs6651252
LINC00824
0.790 0.200 8 128554935 intron variant T/C snv 0.19
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.810 1.000 2 2010 2019
dbSNP: rs6679677
rs6679677
PHTF1
0.653 0.320 1 113761186 upstream gene variant C/A snv 6.7E-02
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.800 1.000 2 2008 2015
dbSNP: rs6908425
rs6908425
CDKAL1
0.752 0.320 6 20728500 intron variant T/C snv 0.78
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.800 1.000 2 2008 2015
dbSNP: rs7702331
rs7702331
LOC105379031
1.000 0.040 5 73255307 intron variant A/G snv 0.42
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.800 1.000 2 2010 2012
dbSNP: rs9271366
rs9271366 		0.807 0.240 6 32619077 intergenic variant G/A snv 0.86
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.820 1.000 2 2011 2015