Source: BEFREE

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs12826786
rs12826786 		0.683 0.480 12 53961717 upstream gene variant C/T snv 0.38
CUI: C0600139
Disease: Prostate carcinoma
Prostate carcinoma 		0.020 0.500 2 2017 2018
dbSNP: rs1353855643
rs1353855643
ELAC2
0.925 0.080 17 13000197 frameshift variant T/- del 4.0E-06
CUI: C0600139
Disease: Prostate carcinoma
Prostate carcinoma 		0.020 0.500 2 2005 2008
dbSNP: rs1446725892
rs1446725892
ELAC2
0.925 0.080 17 13000197 missense variant T/C;G snv 4.0E-06; 8.0E-06
CUI: C0600139
Disease: Prostate carcinoma
Prostate carcinoma 		0.020 0.500 2 2005 2008
dbSNP: rs1544410
rs1544410
VDR
0.542 0.760 12 47846052 intron variant C/A;G;T snv
CUI: C0600139
Disease: Prostate carcinoma
Prostate carcinoma 		0.020 0.500 2 2017 2018
dbSNP: rs1800566
rs1800566
NQO1
0.576 0.680 16 69711242 missense variant G/A snv 0.25 0.21
CUI: C0600139
Disease: Prostate carcinoma
Prostate carcinoma 		0.020 0.500 2 2012 2019
dbSNP: rs2231142
rs2231142
ABCG2
0.583 0.680 4 88131171 missense variant G/C;T snv 4.0E-06; 0.12
CUI: C0600139
Disease: Prostate carcinoma
Prostate carcinoma 		0.020 0.500 2 2008 2017
dbSNP: rs2308321
rs2308321
MGMT
0.653 0.480 10 129766800 missense variant A/G snv 9.3E-02 8.7E-02
CUI: C0600139
Disease: Prostate carcinoma
Prostate carcinoma 		0.020 0.500 2 2010 2019
dbSNP: rs2333227
rs2333227
MPO
0.752 0.320 17 58281401 upstream gene variant C/T snv 0.24
CUI: C0600139
Disease: Prostate carcinoma
Prostate carcinoma 		0.020 0.500 2 2008 2013
dbSNP: rs3025039
rs3025039
VEGFA
0.576 0.720 6 43784799 3 prime UTR variant C/T snv 0.13
CUI: C0600139
Disease: Prostate carcinoma
Prostate carcinoma 		0.020 0.500 2 2014 2019
dbSNP: rs5275
rs5275
PTGS2
0.583 0.560 1 186673926 3 prime UTR variant A/G;T snv
CUI: C0600139
Disease: Prostate carcinoma
Prostate carcinoma 		0.020 0.500 2 2008 2011
dbSNP: rs531523727
rs531523727
ELAC2
0.925 0.080 17 12998442 missense variant C/T snv 1.6E-05 2.1E-05
CUI: C0600139
Disease: Prostate carcinoma
Prostate carcinoma 		0.020 0.500 2 2005 2008
dbSNP: rs699947
rs699947
VEGFA
0.570 0.680 6 43768652 upstream gene variant A/C;T snv
CUI: C0600139
Disease: Prostate carcinoma
Prostate carcinoma 		0.020 0.500 2 2013 2018
dbSNP: rs72551387
rs72551387
UGT2B17
0.882 0.080 4 68568232 missense variant C/A snv 5.7E-03 5.7E-03
CUI: C0600139
Disease: Prostate carcinoma
Prostate carcinoma 		0.020 0.500 2 2013 2017
dbSNP: rs758272654
rs758272654
GNAS
0.611 0.680 20 58909201 synonymous variant T/C snv 4.0E-06 7.0E-06
CUI: C0600139
Disease: Prostate carcinoma
Prostate carcinoma 		0.020 0.500 2 2009 2011
dbSNP: rs763059810
rs763059810
CXCR4
0.623 0.600 2 136115750 missense variant T/C snv 4.0E-06
CUI: C0600139
Disease: Prostate carcinoma
Prostate carcinoma 		0.020 0.500 2 2012 2015
dbSNP: rs7804372
rs7804372
CAV1
0.716 0.320 7 116554174 intron variant T/A snv 0.27
CUI: C0600139
Disease: Prostate carcinoma
Prostate carcinoma 		0.020 0.500 2 2011 2013
dbSNP: rs62113212
rs62113212
KLK3
0.925 0.080 19 50857584 non coding transcript exon variant C/G;T snv
CUI: C0600139
Disease: Prostate carcinoma
Prostate carcinoma 		0.710 0.500 1 2011 2015
dbSNP: rs9282858
rs9282858
SRD5A2
0.716 0.320 2 31580756 missense variant C/T snv 1.8E-02 2.1E-02
CUI: C0600139
Disease: Prostate carcinoma
Prostate carcinoma 		0.100 0.556 18 1999 2017
dbSNP: rs1034866440
rs1034866440
AR
0.851 0.160 X 67643401 missense variant G/A snv 5.7E-06
CUI: C0600139
Disease: Prostate carcinoma
Prostate carcinoma 		0.050 0.600 5 2001 2011
dbSNP: rs137852569
rs137852569
AR
0.752 0.320 X 67686030 missense variant G/A snv 9.4E-06
CUI: C0600139
Disease: Prostate carcinoma
Prostate carcinoma 		0.050 0.600 5 2001 2011
dbSNP: rs2910164
rs2910164
MIR146A ; MIR3142HG
0.447 0.880 5 160485411 mature miRNA variant C/G snv 0.71; 4.1E-06 0.70
CUI: C0600139
Disease: Prostate carcinoma
Prostate carcinoma 		0.050 0.600 5 2010 2018
dbSNP: rs4680
rs4680
COMT ; MIR4761
0.442 0.920 22 19963748 missense variant G/A snv 0.46 0.44
CUI: C0600139
Disease: Prostate carcinoma
Prostate carcinoma 		0.090 0.667 9 2005 2016
dbSNP: rs1042522
rs1042522
TP53
0.426 0.800 17 7676154 missense variant G/C;T snv 0.67
CUI: C0600139
Disease: Prostate carcinoma
Prostate carcinoma 		0.060 0.667 6 2007 2016
dbSNP: rs1131691014
rs1131691014
TP53
0.439 0.800 17 7676154 frameshift variant -/C ins
CUI: C0600139
Disease: Prostate carcinoma
Prostate carcinoma 		0.060 0.667 6 2007 2016
dbSNP: rs878854066
rs878854066
TP53
0.439 0.800 17 7676153 missense variant GG/AC mnv
CUI: C0600139
Disease: Prostate carcinoma
Prostate carcinoma 		0.060 0.667 6 2007 2016