Source: ALL

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs2430561
rs2430561
IFNG ; IFNG-AS1
0.590 0.760 12 68158742 intron variant T/A snv 0.36
CUI: C0206139
Disease: Lichen Planus, Oral
Lichen Planus, Oral 		0.020 0.500 2 2012 2018
dbSNP: rs148704956
rs148704956
IL17A
0.716 0.360 6 52187772 missense variant A/G snv 8.0E-06 7.0E-06
CUI: C0206139
Disease: Lichen Planus, Oral
Lichen Planus, Oral 		0.010 1.000 1 2018 2018
dbSNP: rs16906252
rs16906252
MGMT
0.732 0.200 10 129467281 synonymous variant C/T snv 5.5E-02 5.1E-02
CUI: C0206139
Disease: Lichen Planus, Oral
Lichen Planus, Oral 		0.010 1.000 1 2019 2019
dbSNP: rs1801133
rs1801133
MTHFR
0.472 0.880 1 11796321 missense variant G/A snv 0.31 0.27
CUI: C0206139
Disease: Lichen Planus, Oral
Lichen Planus, Oral 		0.010 1.000 1 2016 2016
dbSNP: rs189667
rs189667
IL18
1.000 0.080 11 112162881 intron variant A/G snv 0.25
CUI: C0206139
Disease: Lichen Planus, Oral
Lichen Planus, Oral 		0.010 1.000 1 2007 2007
dbSNP: rs2227306
rs2227306
CXCL8
0.677 0.680 4 73741338 intron variant C/T snv 0.31
CUI: C0206139
Disease: Lichen Planus, Oral
Lichen Planus, Oral 		0.010 1.000 1 2010 2010
dbSNP: rs2228570
rs2228570
VDR
0.521 0.760 12 47879112 start lost A/C;G;T snv 0.63
CUI: C0206139
Disease: Lichen Planus, Oral
Lichen Planus, Oral 		0.010 1.000 1 2016 2016
dbSNP: rs2243143
rs2243143
IL12A-AS1
1.000 0.080 3 159997015 intron variant G/A snv 0.44
CUI: C0206139
Disease: Lichen Planus, Oral
Lichen Planus, Oral 		0.010 1.000 1 2015 2015
dbSNP: rs2296241
rs2296241
CYP24A1
0.763 0.200 20 54169680 synonymous variant G/A snv 0.49 0.51
CUI: C0206139
Disease: Lichen Planus, Oral
Lichen Planus, Oral 		0.010 1.000 1 2016 2016
dbSNP: rs2372736
rs2372736 		1.000 0.080 3 80958514 intergenic variant G/A snv 6.5E-02
CUI: C0206139
Disease: Lichen Planus, Oral
Lichen Planus, Oral 		0.010 1.000 1 2011 2011
dbSNP: rs3775291
rs3775291
TLR3
0.602 0.640 4 186082920 missense variant C/G;T snv 1.2E-04; 0.28
CUI: C0206139
Disease: Lichen Planus, Oral
Lichen Planus, Oral 		0.010 1.000 1 2013 2013
dbSNP: rs4073
rs4073
CXCL8
0.566 0.800 4 73740307 upstream gene variant A/T snv 0.46
CUI: C0206139
Disease: Lichen Planus, Oral
Lichen Planus, Oral 		0.010 1.000 1 2018 2018
dbSNP: rs4516035
rs4516035
VDR
0.776 0.360 12 47906043 non coding transcript exon variant T/C snv 0.31
CUI: C0206139
Disease: Lichen Planus, Oral
Lichen Planus, Oral 		0.010 1.000 1 2016 2016
dbSNP: rs4646536
rs4646536
CYP27B1
0.724 0.440 12 57764205 intron variant A/G snv 0.38 0.32
CUI: C0206139
Disease: Lichen Planus, Oral
Lichen Planus, Oral 		0.010 1.000 1 2016 2016
dbSNP: rs4774
rs4774
CIITA
0.807 0.240 16 10906991 missense variant G/C snv 0.30 0.28
CUI: C0206139
Disease: Lichen Planus, Oral
Lichen Planus, Oral 		0.010 1.000 1 2013 2013
dbSNP: rs568408
rs568408
IL12A ; IL12A-AS1
0.649 0.600 3 159995680 3 prime UTR variant G/A snv 0.16
CUI: C0206139
Disease: Lichen Planus, Oral
Lichen Planus, Oral 		0.010 1.000 1 2015 2015
dbSNP: rs5743312
rs5743312
TLR3
0.827 0.160 4 186079102 intron variant C/T snv 0.14
CUI: C0206139
Disease: Lichen Planus, Oral
Lichen Planus, Oral 		0.010 1.000 1 2013 2013
dbSNP: rs6498122
rs6498122
CIITA ; LOC112267907
1.000 0.080 16 10900325 intron variant G/A;T snv
CUI: C0206139
Disease: Lichen Planus, Oral
Lichen Planus, Oral 		0.010 1.000 1 2013 2013
dbSNP: rs731236
rs731236
VDR
0.542 0.760 12 47844974 synonymous variant A/G snv 0.33 0.34
CUI: C0206139
Disease: Lichen Planus, Oral
Lichen Planus, Oral 		0.010 1.000 1 2016 2016
dbSNP: rs7975232
rs7975232
VDR
0.576 0.760 12 47845054 intron variant C/A snv 0.51 0.55
CUI: C0206139
Disease: Lichen Planus, Oral
Lichen Planus, Oral 		0.010 1.000 1 2016 2016