Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs6547741
rs6547741
CUI: C0153381
Disease: Malignant neoplasm of mouth
Malignant neoplasm of mouth
G 0.710 GeneticVariation GWASCAT Oral cancer was associated with two new regions, 2p23.3 (rs6547741, GPN1) and 9q34.12 (rs928674, LAMC3), and with known cancer-related loci-9p21.3 (rs8181047, CDKN2B-AS1) and 5p15.33 (rs10462706, CLPTM1L). 27749845

2016

dbSNP: rs6547741
rs6547741
CUI: C0153381
Disease: Malignant neoplasm of mouth
Malignant neoplasm of mouth
0.710 GeneticVariation BEFREE Oral cancer was associated with two new regions, 2p23.3 (rs6547741, GPN1) and 9q34.12 (rs928674, LAMC3), and with known cancer-related loci-9p21.3 (rs8181047, CDKN2B-AS1) and 5p15.33 (rs10462706, CLPTM1L). 27749845

2016

dbSNP: rs10462706
rs10462706
CUI: C0153381
Disease: Malignant neoplasm of mouth
Malignant neoplasm of mouth
C 0.700 GeneticVariation GWASCAT Oral cancer was associated with two new regions, 2p23.3 (rs6547741, GPN1) and 9q34.12 (rs928674, LAMC3), and with known cancer-related loci-9p21.3 (rs8181047, CDKN2B-AS1) and 5p15.33 (rs10462706, CLPTM1L). 27749845

2016

dbSNP: rs10851478
rs10851478
CUI: C0153381
Disease: Malignant neoplasm of mouth
Malignant neoplasm of mouth
G 0.700 GeneticVariation GWASCAT Genome-wide association analyses identify new susceptibility loci for oral cavity and pharyngeal cancer. 27749845

2016

dbSNP: rs1229984
rs1229984
CUI: C0153381
Disease: Malignant neoplasm of mouth
Malignant neoplasm of mouth
G 0.700 GeneticVariation GWASCAT Genome-wide association analyses identify new susceptibility loci for oral cavity and pharyngeal cancer. 27749845

2016

dbSNP: rs1453414
rs1453414
CUI: C0153381
Disease: Malignant neoplasm of mouth
Malignant neoplasm of mouth
C 0.700 GeneticVariation GWASCAT Genome-wide association analyses identify new susceptibility loci for oral cavity and pharyngeal cancer. 27749845

2016

dbSNP: rs1800628
rs1800628
CUI: C0153381
Disease: Malignant neoplasm of mouth
Malignant neoplasm of mouth
A 0.700 GeneticVariation GWASCAT Genome-wide association analyses identify new susceptibility loci for oral cavity and pharyngeal cancer. 27749845

2016

dbSNP: rs2398180
rs2398180
CUI: C0153381
Disease: Malignant neoplasm of mouth
Malignant neoplasm of mouth
T 0.700 GeneticVariation GWASCAT Genome-wide association analyses identify new susceptibility loci for oral cavity and pharyngeal cancer. 27749845

2016

dbSNP: rs3129780
rs3129780
CUI: C0153381
Disease: Malignant neoplasm of mouth
Malignant neoplasm of mouth
A 0.700 GeneticVariation GWASCAT Genome-wide association analyses identify new susceptibility loci for oral cavity and pharyngeal cancer. 27749845

2016

dbSNP: rs3828805
rs3828805
CUI: C0153381
Disease: Malignant neoplasm of mouth
Malignant neoplasm of mouth
C 0.700 GeneticVariation GWASCAT Genome-wide association analyses identify new susceptibility loci for oral cavity and pharyngeal cancer. 27749845

2016

dbSNP: rs77452476
rs77452476
CUI: C0153381
Disease: Malignant neoplasm of mouth
Malignant neoplasm of mouth
C 0.700 GeneticVariation GWASCAT Genome-wide association analyses identify new susceptibility loci for oral cavity and pharyngeal cancer. 27749845

2016

dbSNP: rs79767424
rs79767424
CUI: C0153381
Disease: Malignant neoplasm of mouth
Malignant neoplasm of mouth
C 0.700 GeneticVariation GWASCAT Genome-wide association analyses identify new susceptibility loci for oral cavity and pharyngeal cancer. 27749845

2016

dbSNP: rs8181047
rs8181047
CUI: C0153381
Disease: Malignant neoplasm of mouth
Malignant neoplasm of mouth
A 0.700 GeneticVariation GWASCAT Oral cancer was associated with two new regions, 2p23.3 (rs6547741, GPN1) and 9q34.12 (rs928674, LAMC3), and with known cancer-related loci-9p21.3 (rs8181047, CDKN2B-AS1) and 5p15.33 (rs10462706, CLPTM1L). 27749845

2016

dbSNP: rs928674
rs928674
CUI: C0153381
Disease: Malignant neoplasm of mouth
Malignant neoplasm of mouth
G 0.700 GeneticVariation GWASCAT Oral cancer was associated with two new regions, 2p23.3 (rs6547741, GPN1) and 9q34.12 (rs928674, LAMC3), and with known cancer-related loci-9p21.3 (rs8181047, CDKN2B-AS1) and 5p15.33 (rs10462706, CLPTM1L). 27749845

2016

dbSNP: rs1217691063
rs1217691063
CUI: C0153381
Disease: Malignant neoplasm of mouth
Malignant neoplasm of mouth
0.080 GeneticVariation BEFREE Pooled results indicated that neither C677T</span> nor A1298C polymorphism was associated with oral cancer susceptibility. 28138253

2017

dbSNP: rs1217691063
rs1217691063
CUI: C0153381
Disease: Malignant neoplasm of mouth
Malignant neoplasm of mouth
0.080 GeneticVariation BEFREE The goals of this study were to evaluate the association of three genotypic polymorphism (MTHFR C677T, MTHFR A1298C and CBS 844ins68) and oral cancer risk in southeastern Brazilians and evaluate the interactions between polymorphisms and clinical histopathological parameters. 26749456

2016

dbSNP: rs1217691063
rs1217691063
CUI: C0153381
Disease: Malignant neoplasm of mouth
Malignant neoplasm of mouth
0.080 GeneticVariation BEFREE Among these 14 variants, 9 variants were reported to be significantly associated with the risk of oral cancer (CYP1A1-MspI, CYP2E1-RsaI/PstI, MTHFR-C677T, p73-G4C14-to-A4T14, XRCC1-Arg194Trp, CYP1A1-Ile462Val, GSTM1-±, and NAT2 slow vs rapid). 24102947

2014

dbSNP: rs1217691063
rs1217691063
CUI: C0153381
Disease: Malignant neoplasm of mouth
Malignant neoplasm of mouth
0.080 GeneticVariation BEFREE These results suggest that MTHFR C677T polymorphism may play a role in oral cancer carcinogenesis in Asian population and heavy drinkers. 24488626

2014

dbSNP: rs1217691063
rs1217691063
CUI: C0153381
Disease: Malignant neoplasm of mouth
Malignant neoplasm of mouth
0.080 GeneticVariation BEFREE Here we observed MTHFR C677T to influence oral cancer susceptibility, while A1298C polymorphism associated with patient prognosis. 20923444

2011

dbSNP: rs1217691063
rs1217691063
CUI: C0153381
Disease: Malignant neoplasm of mouth
Malignant neoplasm of mouth
0.080 GeneticVariation BEFREE Those patients with MTHFR C677T CT and TT genotypes also had a lower risk of oral cancer metastasis. 21737671

2011

dbSNP: rs1217691063
rs1217691063
CUI: C0153381
Disease: Malignant neoplasm of mouth
Malignant neoplasm of mouth
0.080 GeneticVariation BEFREE Interaction between the MTHFR C677T polymorphism and alcohol--impact on oral cancer risk and multiple DNA methylation of tumor-related genes. 20940365

2011

dbSNP: rs1217691063
rs1217691063
CUI: C0153381
Disease: Malignant neoplasm of mouth
Malignant neoplasm of mouth
0.080 GeneticVariation BEFREE Folate intake, serum homocysteine and methylenetetrahydrofolate reductase (MTHFR) C677T genotype are not associated with oral cancer risk in Puerto Rico. 11925474

2002

dbSNP: rs1799782
rs1799782
CUI: C0153381
Disease: Malignant neoplasm of mouth
Malignant neoplasm of mouth
0.080 GeneticVariation BEFREE The best two-factor based G×G interaction of ora</span>l cancer included the XRCC1 rs1799782 and XRCC2 rs2040639 [OR=3.13, 95% CI=1.66-6.13]. 25831063

2015

dbSNP: rs1799782
rs1799782
CUI: C0153381
Disease: Malignant neoplasm of mouth
Malignant neoplasm of mouth
0.080 GeneticVariation BEFREE The meta-analysis results suggest that the XRCC1 Arg399Gln and Arg280His polymorphisms are probably not associated with the risk of HNC, but the XRCC1 Arg194Trp polymorphism was associated with increased risk of HNC in the subgroup analysis of studies adjusted for smoking and alcohol and with increased risk of oral cancer in the stratified analyses based on cancer site. 24497981

2014

dbSNP: rs1799782
rs1799782
CUI: C0153381
Disease: Malignant neoplasm of mouth
Malignant neoplasm of mouth
0.080 GeneticVariation BEFREE Among these 14 variants, 9 variants were reported to be significantly associated with the risk of oral cancer (CYP1A1-MspI, CYP2E1-RsaI/PstI, MTHFR-C677T, p73-G4C14-to-A4T14, XRCC1-Arg194Trp, CYP1A1-Ile462Val, GSTM1-±, and NAT2 slow vs rapid). 24102947

2014