Source: GWASDB

Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs3129882
rs3129882
HLA-DRA
CUI: C0030567
Disease: Parkinson Disease
Parkinson Disease 		G 0.900 GeneticVariation GWASDB HLA_rs3129882 was more strongly associated with Sporadic-PD (OR = 1.38, P = 5 × 10(-10)) than Familial-PD (OR = 1.12, P = 0.15). 24511991

2014
dbSNP: rs3129882
rs3129882
HLA-DRA
CUI: C0030567
Disease: Parkinson Disease
Parkinson Disease 		G 0.900 GeneticVariation GWASDB Common genetic variation in the HLA region is associated with late-onset sporadic Parkinson's disease. 20711177

2010
dbSNP: rs3135388
rs3135388
HLA-DRA
CUI: C0026769
Disease: Multiple Sclerosis
Multiple Sclerosis 		A 0.890 GeneticVariation GWASDB Meta-analysis of genome scans and replication identify CD6, IRF8 and TNFRSF1A as new multiple sclerosis susceptibility loci. 19525953

2009
dbSNP: rs3135388
rs3135388
HLA-DRA
CUI: C0026769
Disease: Multiple Sclerosis
Multiple Sclerosis 		A 0.890 GeneticVariation GWASDB Risk alleles for multiple sclerosis identified by a genomewide study. 17660530

2007
dbSNP: rs3129871
rs3129871
HLA-DRA
CUI: C0026769
Disease: Multiple Sclerosis
Multiple Sclerosis 		0.800 GeneticVariation GWASDB Oligoclonal band status in Scandinavian multiple sclerosis patients is associated with specific genetic risk alleles. 23472185

2013
dbSNP: rs3129871
rs3129871
HLA-DRA
CUI: C0026769
Disease: Multiple Sclerosis
Multiple Sclerosis 		0.800 GeneticVariation GWASDB Evidence for VAV2 and ZNF433 as susceptibility genes for multiple sclerosis. 20598377

2010
dbSNP: rs3129882
rs3129882
HLA-DRA
CUI: C0036421
Disease: Systemic Scleroderma
Systemic Scleroderma 		0.800 GeneticVariation GWASDB Identification of novel genetic markers associated with clinical phenotypes of systemic sclerosis through a genome-wide association strategy. 21779181

2011
dbSNP: rs3177928
rs3177928
HLA-DRA
CUI: C1445957
Disease: Serum total cholesterol measurement
Serum total cholesterol measurement 		A 0.800 GeneticVariation GWASDB Discovery and refinement of loci associated with lipid levels. 24097068

2013
dbSNP: rs3177928
rs3177928
HLA-DRA
CUI: C0202117
Disease: Low density lipoprotein cholesterol measurement
Low density lipoprotein cholesterol measurement 		A 0.800 GeneticVariation GWASDB Discovery and refinement of loci associated with lipid levels. 24097068

2013
dbSNP: rs3177928
rs3177928
HLA-DRA
CUI: C1445957
Disease: Serum total cholesterol measurement
Serum total cholesterol measurement 		A 0.800 GeneticVariation GWASDB Biological, clinical and population relevance of 95 loci for blood lipids. 20686565

2010
dbSNP: rs3177928
rs3177928
HLA-DRA
CUI: C0202117
Disease: Low density lipoprotein cholesterol measurement
Low density lipoprotein cholesterol measurement 		A 0.800 GeneticVariation GWASDB Biological, clinical and population relevance of 95 loci for blood lipids. 20686565

2010
dbSNP: rs9268645
rs9268645
HLA-DRA
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.800 GeneticVariation GWASDB Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes. 19430480

2009
dbSNP: rs3129878
rs3129878
HLA-DRA
CUI: C4021107
Disease: Non-obstructive azoospermia
Non-obstructive azoospermia 		0.720 GeneticVariation GWASDB A genome-wide association study reveals that variants within the HLA region are associated with risk for nonobstructive azoospermia. 22541561

2012
dbSNP: rs1041885
rs1041885
HLA-DRA
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 GeneticVariation GWASDB A genome-wide association study suggests contrasting associations in ACPA-positive versus ACPA-negative rheumatoid arthritis. 21156761

2011
dbSNP: rs1051336
rs1051336
HLA-DRA
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 GeneticVariation GWASDB A genome-wide association study suggests contrasting associations in ACPA-positive versus ACPA-negative rheumatoid arthritis. 21156761

2011
dbSNP: rs13218331
rs13218331
HLA-DRA
CUI: C1527304
Disease: Allergic Reaction
Allergic Reaction 		C 0.700 GeneticVariation GWASDB A genome-wide association meta-analysis of self-reported allergy identifies shared and allergy-specific susceptibility loci. 23817569

2013
dbSNP: rs14004
rs14004
HLA-DRA
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 GeneticVariation GWASDB A genome-wide association study suggests contrasting associations in ACPA-positive versus ACPA-negative rheumatoid arthritis. 21156761

2011
dbSNP: rs17496549
rs17496549
HLA-DRA
CUI: C1527304
Disease: Allergic Reaction
Allergic Reaction 		T 0.700 GeneticVariation GWASDB A genome-wide association meta-analysis of self-reported allergy identifies shared and allergy-specific susceptibility loci. 23817569

2013
dbSNP: rs17496549
rs17496549
HLA-DRA
CUI: C1445957
Disease: Serum total cholesterol measurement
Serum total cholesterol measurement 		0.700 GeneticVariation GWASDB Large-scale gene-centric meta-analysis across 32 studies identifies multiple lipid loci. 23063622

2012
dbSNP: rs2213584
rs2213584
HLA-DRA
CUI: C0036202
Disease: Sarcoidosis
Sarcoidosis 		0.700 GeneticVariation GWASDB Genome-wide association study of African and European Americans implicates multiple shared and ethnic specific loci in sarcoidosis susceptibility. 22952805

2012
dbSNP: rs2213585
rs2213585
HLA-DRA
CUI: C0149678
Disease: Epstein-Barr Virus Infections
Epstein-Barr Virus Infections 		0.700 GeneticVariation GWASDB A genome-wide integrative genomic study localizes genetic factors influencing antibodies against Epstein-Barr virus nuclear antigen 1 (EBNA-1). 23326239

2013
dbSNP: rs2213585
rs2213585
HLA-DRA
CUI: C0036202
Disease: Sarcoidosis
Sarcoidosis 		0.700 GeneticVariation GWASDB Genome-wide association study of African and European Americans implicates multiple shared and ethnic specific loci in sarcoidosis susceptibility. 22952805

2012
dbSNP: rs2213586
rs2213586
HLA-DRA
CUI: C0149678
Disease: Epstein-Barr Virus Infections
Epstein-Barr Virus Infections 		0.700 GeneticVariation GWASDB A genome-wide integrative genomic study localizes genetic factors influencing antibodies against Epstein-Barr virus nuclear antigen 1 (EBNA-1). 23326239

2013
dbSNP: rs2213586
rs2213586
HLA-DRA
CUI: C0036202
Disease: Sarcoidosis
Sarcoidosis 		0.700 GeneticVariation GWASDB Genome-wide association study of African and European Americans implicates multiple shared and ethnic specific loci in sarcoidosis susceptibility. 22952805

2012
dbSNP: rs2239802
rs2239802
HLA-DRA
CUI: C0149678
Disease: Epstein-Barr Virus Infections
Epstein-Barr Virus Infections 		0.700 GeneticVariation GWASDB A genome-wide integrative genomic study localizes genetic factors influencing antibodies against Epstein-Barr virus nuclear antigen 1 (EBNA-1). 23326239

2013