Source: BEFREE

Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs752021744
rs752021744
CUI: C0027651
Disease: Neoplasms
Neoplasms
0.070 GeneticVariation BEFREE We analyzed tumor growth in mice that expressed the oncogenic form of KRAS (KRAS(G12D)) in pancreatic precursor cells, as well as sst2+/- and sst2-/-, and in crossed KRAS(G12D);sst2+/- and KRAS(G12D);sst2-/- mice. 25683115

2015

dbSNP: rs752021744
rs752021744
CUI: C0027651
Disease: Neoplasms
Neoplasms
0.070 GeneticVariation BEFREE Furthermore, isoform-selective inhibitors showed a similar pattern of the isoform dependence in established Kras(G12D)/PTEN-deficient tumors. 24737887

2014

dbSNP: rs752021744
rs752021744
CUI: C0027651
Disease: Neoplasms
Neoplasms
0.070 GeneticVariation BEFREE Most genes from this signature are also upregulated in poorly differentiated tumors developing in Pten(thyr-/-),Kras(G12D) mice. 23509868

2013

dbSNP: rs752021744
rs752021744
CUI: C0027651
Disease: Neoplasms
Neoplasms
0.070 GeneticVariation BEFREE Treatment of Kras(G12D) mice with either of two distinct small molecule Pak inhibitors (PF3758309 and FRAX597) caused tumor regression and loss of Erk and Akt activity. 22983922

2012

dbSNP: rs752021744
rs752021744
CUI: C0027651
Disease: Neoplasms
Neoplasms
0.070 GeneticVariation BEFREE Moreover, we show that KRAS(G12D)- and BRAF(V600E)-induced tumor formation in an orthotopic model requires IGF1R. 22871572

2012

dbSNP: rs752021744
rs752021744
CUI: C0027651
Disease: Neoplasms
Neoplasms
0.070 GeneticVariation BEFREE Finally, m-CT imaging in live Kras(G12D-LSL) mice showed reduction of tumor burdens in PD-0325901-treated animals at sub-MTD dose. 22684718

2012

dbSNP: rs752021744
rs752021744
CUI: C0027651
Disease: Neoplasms
Neoplasms
0.070 GeneticVariation BEFREE In LSL-K-ras(G12D/+)Pten(loxP/loxP) mice with established intraperitoneal tumor disease, oral administration of NVP-BEZ235 decreased pAkt, p4E-BP1 and Ki67 in tumor tissue, and resulted in significantly longer survival compared to control animals (P < 0.05). 21372221

2011

dbSNP: rs752742313
rs752742313
CUI: C0027651
Disease: Neoplasms
Neoplasms
0.060 GeneticVariation BEFREE Similarly, in human HCC cell lines, silencing of SGK3 reduced PIK3CA(E545K) -but not PIK3CA(H1047R)- induced accelerated tumor cell proliferation. 30975125

2019

dbSNP: rs752742313
rs752742313
CUI: C0027651
Disease: Neoplasms
Neoplasms
0.060 GeneticVariation BEFREE Formalin-fixed paraffin-embedded tumour specimens from 118 HER2-overexpressing breast cancer patients treated with radical local therapy and trastuzumab in adjuvant setting were used for the assessment of: (1) PIK3CA gene mutations (p.H1047R and p.E545K) by qPCR, and (2) expression of Ki-67, EGFR, MUC4, HER3 and PTEN by immunohistochemistry. 28123607

2017

dbSNP: rs752742313
rs752742313
CUI: C0027651
Disease: Neoplasms
Neoplasms
0.060 GeneticVariation BEFREE The E545K mutation promoted proliferation, migration and invasion of GBC cells in vitro and tumor proliferation in vivo. 27317099

2016

dbSNP: rs752742313
rs752742313
CUI: C0027651
Disease: Neoplasms
Neoplasms
0.060 GeneticVariation BEFREE As a proof of the concept, we present the case of a metastatic patient with a PIK3CA wild-type primary tumor in which the PIK3CA E545K mutation was identified in both the circulating-free DNA obtained from a peripheral blood sample and in the formalin-fixed, paraffin-embedded liver metastasis. 26001593

2015

dbSNP: rs752742313
rs752742313
CUI: C0027651
Disease: Neoplasms
Neoplasms
0.060 GeneticVariation BEFREE Moreover, PIK3CA hotspot mutations (c.1624G>A [p.Glu542Lys] and c.1633G>A [p.Glu545Lys]) were enriched in APOBEC-signature tumors, and no smoking-associated signature was observed in ESCC. 25839328

2015

dbSNP: rs752742313
rs752742313
CUI: C0027651
Disease: Neoplasms
Neoplasms
0.060 GeneticVariation BEFREE PIK3CA mutations were detected in 25% of tumors and 26% of cell lines with a significant excess of helical domain mutations (E542K and E545K). 19789314

2009

dbSNP: rs752742313
rs752742313
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast
0.030 GeneticVariation BEFREE Formalin-fixed paraffin-embedded tumour specimens from 118 HER2-overexpressing breast cancer patients treated with radical local therapy and trastuzumab in adjuvant setting were used for the assessment of: (1) PIK3CA gene mutations (p.H1047R and p.E545K) by qPCR, and (2) expression of Ki-67, EGFR, MUC4, HER3 and PTEN by immunohistochemistry. 28123607

2017

dbSNP: rs752742313
rs752742313
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast
0.030 GeneticVariation BEFREE Using a variety of physiologically relevant model systems with defined natural or knock-in PIK3CA mutations and/or PI3K hyperactivation, we show that PIK3CA-E545K mutations (found in ∼20% of PIK3CA-mutant breast cancers), but not PIK3CA-H1047R mutations (found in 55% of PIK3CA-mutant breast cancers), preferentially activate AKT1. 27197157

2016

dbSNP: rs752742313
rs752742313
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast
0.030 GeneticVariation BEFREE We further validated the approach in breast cancer cells with mutational activation of PIK3CA, where tandem mass spectrometry detected and quantitatively measured the abundance of a helical domain mutant (E545K) of PIK3CA connected to PI3K activation. 21775521

2011

dbSNP: rs361072
rs361072
CUI: C0028754
Disease: Obesity
Obesity
0.020 GeneticVariation BEFREE No association with HOMA-IR or type 2 diabetes (odds ratio 1.07, P = 0.5) was identified, and obesity did not interact with rs361072 on these traits. 20107106

2010

dbSNP: rs361072
rs361072
Diabetes Mellitus, Non-Insulin-Dependent
0.020 GeneticVariation BEFREE No association with HOMA-IR or type 2 diabetes (odds ratio 1.07, P = 0.5) was identified, and obesity did not interact with rs361072 on these traits. 20107106

2010

dbSNP: rs361072
rs361072
Diabetes Mellitus, Non-Insulin-Dependent
0.020 GeneticVariation BEFREE In obese and non-obese adults, the cis-regulatory rs361072 promoter variant of PIK3CB is associated with insulin resistance not with type 2 diabetes. 19097921

2009

dbSNP: rs361072
rs361072
CUI: C0028754
Disease: Obesity
Obesity
0.020 GeneticVariation BEFREE GATA-binding and functional effects of rs361072 were explored in transfected cell lines and in lymphocytes from obese children. 17977952

2008

dbSNP: rs752021744
rs752021744
CUI: C2939419
Disease: Secondary Neoplasm
Secondary Neoplasm
0.020 GeneticVariation BEFREE GTPase-impairing somatic mutations in RAS genes, such as KRAS(G12D), are among the most common oncogenic events in metastatic cancer. 26549032

2016

dbSNP: rs752021744
rs752021744
CUI: C0027627
Disease: Neoplasm Metastasis
Neoplasm Metastasis
0.020 GeneticVariation BEFREE GTPase-impairing somatic mutations in RAS genes, such as KRAS(G12D), are among the most common oncogenic events in metastatic cancer. 26549032

2016

dbSNP: rs752021744
rs752021744
CUI: C0596263
Disease: Carcinogenesis
Carcinogenesis
0.020 GeneticVariation BEFREE Administration of a CXCL16-neutralizing antibody to KRAS(G12D) mice reduced activation of PI3K signaling to AKT and NF-κB, blocking carcinogenesis. 25683115

2015

dbSNP: rs752021744
rs752021744
CUI: C1306459
Disease: Primary malignant neoplasm
Primary malignant neoplasm
0.020 GeneticVariation BEFREE Although mutations in known driver genes typically occurred early in cancer evolution, we also identified later subclonal "actionable" mutations, including BRAF (V600E), IDH1 (R132H), PIK3CA (E545K), EGFR (L858R), and KRAS (G12D), which may compromise the efficacy of targeted therapy approaches. 25877892

2015

dbSNP: rs752021744
rs752021744
CUI: C0006826
Disease: Malignant Neoplasms
Malignant Neoplasms
0.020 GeneticVariation BEFREE Although mutations in known driver genes typically occurred early in cancer evolution, we also identified later subclonal "actionable" mutations, including BRAF (V600E), IDH1 (R132H), PIK3CA (E545K), EGFR (L858R), and KRAS (G12D), which may compromise the efficacy of targeted therapy approaches. 25877892

2015