Source: BEFREE

Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs1057519943
rs1057519943
CUI: C0027651
Disease: Neoplasms
Neoplasms
0.020 GeneticVariation BEFREE All POLE mutations in the early-onset (age of onset ≤50 years old) POLE category (7 tumors) were P286R mutations. 31240875

2019

dbSNP: rs1057519943
rs1057519943
CUI: C0027651
Disease: Neoplasms
Neoplasms
0.020 GeneticVariation BEFREE Ten of the remaining 17 undifferentiated carcinomas showed the following alterations: 5 tumors (15%) showed loss of ARID1A only with intact ARID1B, BRG1, and INI1 expression, 4 tumors (12%) showed mutated patterns of p53 staining with intact SWI/SNF protein expression, and 1 tumor (3%) harbored a POLE exonuclease domain mutation (P286R). 28863077

2018

dbSNP: rs1057519945
rs1057519945
CUI: C0006826
Disease: Malignant Neoplasms
Malignant Neoplasms
0.020 GeneticVariation BEFREE This is the youngest reported cancer patient with polymerase proofreading-associated polyposis indicating that POLE mutation p.(Val411Leu) may confer a more severe phenotype than previously reported POLE and POLD1 germline mutations. 27573199

2017

dbSNP: rs1057519945
rs1057519945
CUI: C1306459
Disease: Primary malignant neoplasm
Primary malignant neoplasm
0.020 GeneticVariation BEFREE This is the youngest reported cancer patient with polymerase proofreading-associated polyposis indicating that POLE mutation p.(Val411Leu) may confer a more severe phenotype than previously reported POLE and POLD1 germline mutations. 27573199

2017

dbSNP: rs1057519945
rs1057519945
CUI: C0006826
Disease: Malignant Neoplasms
Malignant Neoplasms
0.020 GeneticVariation BEFREE Our results showed for the first time that the POLE1 p.S297F mutation, but not p.P286R and p.V411L hotspot mutations observed in other cancer types, was frequent in Chinese ovarian endometrioid carcinoma, but absent in other subtypes of ovarian carcinoma. 24472300

2014

dbSNP: rs1057519945
rs1057519945
CUI: C1306459
Disease: Primary malignant neoplasm
Primary malignant neoplasm
0.020 GeneticVariation BEFREE Our results showed for the first time that the POLE1 p.S297F mutation, but not p.P286R and p.V411L hotspot mutations observed in other cancer types, was frequent in Chinese ovarian endometrioid carcinoma, but absent in other subtypes of ovarian carcinoma. 24472300

2014

dbSNP: rs483352909
rs483352909
CUI: C0334108
Disease: Multiple polyps
Multiple polyps
0.020 GeneticVariation BEFREE In addition to the POLE p.L424V recurrent mutation in a patient with polyposis, CRC and oligodendroglioma, six novel or rare POLD1 variants (four of them, p.D316H, p.D316G, p.R409W, and p.L474P, with strong evidence for pathogenicity) were identified in nonpolyposis CRC families. 26133394

2016

dbSNP: rs483352909
rs483352909
CUI: C0334108
Disease: Multiple polyps
Multiple polyps
0.020 GeneticVariation BEFREE We examined 1188 familial CRC and polyposis index patients for POLE p.(Leu424Val) and POLD1 p.(Ser478Asn) variants using competitive allele-specific PCR. 25370038

2015

dbSNP: rs1057519943
rs1057519943
CUI: C0206687
Disease: Carcinoma, Endometrioid
Carcinoma, Endometrioid
0.010 GeneticVariation BEFREE <b>Methods:</b> Among 51 paraffin-embedded samples of high-grade EC, BaseScope-ISH assays were used to detect the RNA mutation status of the POLE gene, mainly focusing on two hotspot mutations of P286R and V411L. 31552169

2019

dbSNP: rs1057519943
rs1057519943
CUI: C0205698
Disease: Undifferentiated carcinoma
Undifferentiated carcinoma
0.010 GeneticVariation BEFREE Ten of the remaining 17 undifferentiated carcinomas showed the following alterations: 5 tumors (15%) showed loss of ARID1A only with intact ARID1B, BRG1, and INI1 expression, 4 tumors (12%) showed mutated patterns of p53 staining with intact SWI/SNF protein expression, and 1 tumor (3%) harbored a POLE exonuclease domain mutation (P286R). 28863077

2018

dbSNP: rs1057519943
rs1057519943
Malignant neoplasm of colon and/or rectum
0.010 GeneticVariation BEFREE The somatic POLE P286R mutation defines a unique subclass of colorectal cancer featuring hypermutation, representing a potential genomic biomarker for immunotherapy. 27612425

2016

dbSNP: rs1057519943
rs1057519943
CUI: C0009402
Disease: Colorectal Carcinoma
Colorectal Carcinoma
0.010 GeneticVariation BEFREE The somatic POLE P286R mutation defines a unique subclass of colorectal cancer featuring hypermutation, representing a potential genomic biomarker for immunotherapy. 27612425

2016

dbSNP: rs1057519945
rs1057519945
CUI: C0027651
Disease: Neoplasms
Neoplasms
0.010 GeneticVariation BEFREE POLE category tumors harbored a significantly higher SNV count than common-hypermutators, and all POLE category tumors were associated with exonuclease domain mutations, such as P286R, F367C, V411L, and S297Y, in the POLE gene. 31240875

2019

dbSNP: rs1057519945
rs1057519945
CUI: C0206687
Disease: Carcinoma, Endometrioid
Carcinoma, Endometrioid
0.010 GeneticVariation BEFREE <b>Methods:</b> Among 51 paraffin-embedded samples of high-grade EC, BaseScope-ISH assays were used to detect the RNA mutation status of the POLE gene, mainly focusing on two hotspot mutations of P286R and V411L. 31552169

2019

dbSNP: rs1057519945
rs1057519945
CUI: C0476089
Disease: Endometrial Carcinoma
Endometrial Carcinoma
0.010 GeneticVariation BEFREE Sensitivity to radiotherapy and selected chemotherapeutics was compared between <i>Pole</i>-mutant mouse-derived embryonic stem (mES) cells, generated using CRISPR-Cas9 (<i>Pole</i> mutations D275A/E275A, and cancer-associated P286R, S297F, V411L) and isogenic wild-type cell lines.<b>Results:</b> In the observation arm of the PORTEC-1 trial (<i>N</i> = 245), women with <i>POLE</i>-mutant endometrial cancers (<i>N</i> = 16) had an improved recurrence-free survival (10-year recurrence-free survival 100% vs. 80.1% for <i>POLE-</i>wild-type; HR, 0.143; 95% confidence interval, 0.001-0.996; <i>P</i> = 0.049). 29559562

2018

dbSNP: rs1057519945
rs1057519945
CUI: C0334108
Disease: Multiple polyps
Multiple polyps
0.010 GeneticVariation BEFREE This is the youngest reported cancer patient with polymerase proofreading-associated polyposis indicating that POLE mutation p.(Val411Leu) may confer a more severe phenotype than previously reported POLE and POLD1 germline mutations. 27573199

2017

dbSNP: rs1057519945
rs1057519945
CUI: C0346163
Disease: Endometrioid carcinoma ovary
Endometrioid carcinoma ovary
0.010 GeneticVariation BEFREE A heterozygous somatic POLE1 mutation, p.S297F (c.890C>T), but not p.P286R and p.V411L hotspot mutations observed in other cancer types, was identified in 3 out of 37 (8.1%) patients with ovarian endometrioid carcinoma; this mutation was evolutionarily highly conserved from Homo sapiens to Schizosaccharomyces. 24472300

2014

dbSNP: rs1232888774
rs1232888774
CUI: C0149978
Disease: Adenocarcinoma of rectum
Adenocarcinoma of rectum
0.010 GeneticVariation BEFREE Using sensitive single-tube nested PCR with subsequent Sanger sequencing, we have found in one female patient diagnosed at age 48 with rectal adenocarcinoma with mucinous elements staged pT3pN2pM1 a silent variant within the exon 9 NM_006231.3 c.849 C > T, NP_00622.2 p.Leu283 = recorded in dSNP as rs1232888774 with MAF = 0.00002. 31049795

2019

dbSNP: rs1323151304
rs1323151304
CUI: C0334294
Disease: Multiple adenomatous polyps
Multiple adenomatous polyps
0.010 GeneticVariation BEFREE Here, we identified a germline frameshift variation in the POLE gene (c.4191_4192delCT, p.Tyr1398*) in a case with multiple adenomatous polyps and three synchronous colon cancers. 31089268

2019

dbSNP: rs1323151304
rs1323151304
CUI: C0007102
Disease: Malignant tumor of colon
Malignant tumor of colon
0.010 GeneticVariation BEFREE Here, we identified a germline frameshift variation in the POLE gene (c.4191_4192delCT, p.Tyr1398*) in a case with multiple adenomatous polyps and three synchronous colon cancers. 31089268

2019

dbSNP: rs146639652
rs146639652
CUI: C1541316
Disease: Adult Giant Cell Glioblastoma
Adult Giant Cell Glioblastoma
0.010 GeneticVariation BEFREE Germline mutation p.N363K in POLE is associated with an increased risk of colorectal cancer and giant cell glioblastoma. 30368636

2019

dbSNP: rs146639652
rs146639652
CUI: C0334588
Disease: Giant Cell Glioblastoma
Giant Cell Glioblastoma
0.010 GeneticVariation BEFREE Germline mutation p.N363K in POLE is associated with an increased risk of colorectal cancer and giant cell glioblastoma. 30368636

2019

dbSNP: rs146639652
rs146639652
CUI: C0009402
Disease: Colorectal Carcinoma
Colorectal Carcinoma
0.010 GeneticVariation BEFREE Germline mutation p.N363K in POLE is associated with an increased risk of colorectal cancer and giant cell glioblastoma. 30368636

2019

dbSNP: rs146639652
rs146639652
CUI: C3899659
Disease: Childhood Giant Cell Glioblastoma
Childhood Giant Cell Glioblastoma
0.010 GeneticVariation BEFREE Germline mutation p.N363K in POLE is associated with an increased risk of colorectal cancer and giant cell glioblastoma. 30368636

2019

dbSNP: rs146639652
rs146639652
Malignant neoplasm of colon and/or rectum
0.010 GeneticVariation BEFREE Germline mutation p.N363K in POLE is associated with an increased risk of colorectal cancer and giant cell glioblastoma. 30368636

2019