Source: ALL
Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 65125
Gene Symbol: WNK1
WNK1
0.010 AlteredExpression phenotype BEFREE Furthermore, IL-8 and TNF-alpha expression and nuclear phosphorylated NF-kappaB p65 expression could be immunohistochemically confirmed in inflamed epithelium with cryptitis or crypt abscess in UC patients. 19369513 2009
Entrez Id: 64127
Gene Symbol: NOD2
NOD2
0.020 GeneticVariation phenotype BEFREE NOD2/CARD15 polymorphisms are not major risk factors for common gastrointestinal diseases; however, we cannot completely exclude association with appendicitis, anal fissure, fistula and abscess, and gastrointestinal cancer. 19570052 2010
Entrez Id: 9051
Gene Symbol: PSTPIP1
PSTPIP1
0.010 Biomarker phenotype BEFREE Longest form of CCTG microsatellite repeat in the promoter of the CD2BP1/PSTPIP1 gene is associated with aseptic abscesses and with Crohn disease in French patients. 19731031 2010
Entrez Id: 9172
Gene Symbol: MYOM2
MYOM2
0.010 Biomarker phenotype BEFREE Bacterial etiology and typing were obtained by PCR and sequencing of the 16S rRNA and M-protein genes from abscess material. 20592151 2010
Entrez Id: 24145
Gene Symbol: PANX1
PANX1
0.010 AlteredExpression phenotype BEFREE The region-dependent pattern of hemichannel activity at day 3 directly correlated with increases in Cx43, Cx30, Panx1, and glutamate transporter expression (glial L-glutamate transporter and L-glutamate/L-aspartate transporter) along the abscess margins. 21228152 2011
Entrez Id: 3605
Gene Symbol: IL17A
IL17A
0.010 Biomarker phenotype BEFREE Although defective differentiation of IL-17-producing CD4(+) T cells (Th17) partly accounts for the susceptibility to staphylococcal skin abscesses and pneumonia, the pathogenesis of atopic manifestations in HIES still remains an enigma. 21300911 2011
Entrez Id: 1491
Gene Symbol: CTH
CTH
0.010 AlteredExpression phenotype BEFREE Streptococcus anginosus l-cysteine desulfhydrase gene expression is associated with abscess formation in BALB/c mice. 21545699 2011
Entrez Id: 1666
Gene Symbol: DECR1
DECR1
0.010 GeneticVariation phenotype BEFREE Chronic granulomatous disease (CGD) is a primary immunodeficiency defined by mutations in the NADPH oxidase complex leading to reduced superoxide production, increased susceptibility to infection, chronic inflammation, and recurring abscess and granuloma formation. 21630251 2011
Entrez Id: 10479
Gene Symbol: SLC9A6
SLC9A6
0.040 Biomarker phenotype BEFREE All MRSA isolates from colonization and abscesses were the same, albeit with a variant in pulsed-field gel electrophoresis analysis. 22160592 2012
Entrez Id: 10479
Gene Symbol: SLC9A6
SLC9A6
0.040 Biomarker phenotype BEFREE We identified only 1 Panton-Valentine leukocidin (PVL)-positive MRSA strain, which belonged to SCCmec type V. The PVL-positive CA-MRSA strain was isolated from a patient with multiple subcutaneous abscesses. 22446128 2012
Entrez Id: 10479
Gene Symbol: SLC9A6
SLC9A6
0.040 Biomarker phenotype BEFREE SpA(KKAA) MAbs promoted opsonophagocytic killing of MRSA in mouse and human blood, provided protection from abscess formation, and stimulated pathogen-specific immune responses in a mouse model of staphylococcal disease. 22825452 2012
Entrez Id: 4015
Gene Symbol: LOX
LOX
0.010 Biomarker phenotype BEFREE Inhibition of LOX by β-aminopropionitrile (BAPN) did not affect the bacterial load in kidneys or blood but significantly influenced abscess morphology and collagenization. 23649089 2013
Entrez Id: 847
Gene Symbol: CAT
CAT
0.050 GeneticVariation phenotype BEFREE Molecular characterization of a catalase-negative methicillin-susceptible Staphylococcus aureus subsp. aureus strain collected from a patient with cutaneous abscess. 24131694 2014
Entrez Id: 847
Gene Symbol: CAT
CAT
0.050 Biomarker phenotype BEFREE Helcococcus spp. are Gram-positive, catalase-negative, facultatively anaerobic cocci that are associated with wound and prosthetic joint infections as well bacteremia and empyema.Five Helcococcus spp. strains were isolated from our patient population, including 2 strains of Helcococcus kunzii from trauma-associated wounds, 2 Helcococcus sueciensis strains from blood and abscess, and a novel Helcococcus spp. strain from blood associated with urosepsis. 24371247 2014
Entrez Id: 3586
Gene Symbol: IL10
IL10
0.010 GeneticVariation phenotype BEFREE Moreover, severe infantile enterocolitis resembling Crohn's disease, caused by loss-of-function mutations in IL-10 and IL-10 receptor, is characterised by a very early onset (usually within the first 3 months of life), unresponsiveness to standard treatment including immunosuppressive therapy, and severe perianal disease with abscesses and fistulas. 25004811 2014
Entrez Id: 4615
Gene Symbol: MYD88
MYD88
0.010 Biomarker phenotype BEFREE MyD88 in macrophages is critical for abscess resolution in staphylococcal skin infection. 25681348 2015
Entrez Id: 50616
Gene Symbol: IL22
IL22
0.010 Biomarker phenotype BEFREE Interestingly, combined inhibition of IL-17A and IL-22 did not worsen abscesses but did increase gamma interferon (IFN-γ) expression at these sites. 26351278 2015
Entrez Id: 4179
Gene Symbol: CD46
CD46
0.010 Biomarker phenotype BEFREE Finally, CD46 Tg mice developed a pus-filled abscess accompanied by renal failure at day 6 or later after infection. 26908231 2016
Entrez Id: 847
Gene Symbol: CAT
CAT
0.050 Biomarker phenotype BEFREE Gram-stain-positive, partially acid-fast, non-spore-forming, anaerobic, catalase-positive, pleomorphic bacteria were isolated from human abscesses. 27130323 2016
Entrez Id: 2588
Gene Symbol: GALNS
GALNS
0.020 Biomarker phenotype BEFREE Magnetic resonance imaging and isolation of GAS from both blood and abscess samples led us to the confirmative diagnosis. 27692341 2016
Entrez Id: 2520
Gene Symbol: GAST
GAST
0.020 Biomarker phenotype BEFREE Magnetic resonance imaging and isolation of GAS from both blood and abscess samples led us to the confirmative diagnosis. 27692341 2016
Entrez Id: 79447
Gene Symbol: PAGR1
PAGR1
0.020 Biomarker phenotype BEFREE Magnetic resonance imaging and isolation of GAS from both blood and abscess samples led us to the confirmative diagnosis. 27692341 2016
Entrez Id: 1401
Gene Symbol: CRP
CRP
0.060 AlteredExpression phenotype BEFREE In a cohort with right-sided abdominal pain, perforation should be considered in children with high CRP levels and free fluids or abscess formation on ultrasound. 27872360 2017
Entrez Id: 84680
Gene Symbol: ACCS
ACCS
0.010 Biomarker phenotype BEFREE The ACS NSQIP-Pediatric participant use file (PUF) was used to determine cross-institutional postoperative abscess rates. 27884453 2017
Entrez Id: 23659
Gene Symbol: PLA2G15
PLA2G15
0.010 Biomarker phenotype BEFREE The ACS NSQIP-Pediatric participant use file (PUF) was used to determine cross-institutional postoperative abscess rates. 27884453 2017