Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 201163
Gene Symbol: FLCN
FLCN
0.900 Biomarker disease BEFREE In a search for potential synthetic-lethal targets for FLCN using a phosphatase siRNA library screening approach, we found that knockdown of SSH2 serine phosphatase (one of the three members of Slingshot family and previously implicated in actin reorganization) specifically induced Caspase3/7 activity in a dose-dependent manner (up to six-fold increase, 10 nM, 72 h) in two human FLCN-deficient cell lines (BHD-origin renal cell carcinoma UOK257 and thyroid carcinoma FTC133) but not in their folliculin expressing isogenic cell lines. 23416984 2014
Entrez Id: 7428
Gene Symbol: VHL
VHL
0.700 GeneticVariation disease BEFREE Although CA XII expression levels tended to be lower in RCC cell lines without the VHL mutation and in transformants of the wild-type VHL gene, the results were not conclusive. 12384800 2002
Entrez Id: 7428
Gene Symbol: VHL
VHL
0.700 Biomarker disease BEFREE Although histologically distinct RCC subtypes exist, emerging themes shared between hereditary and sporadic RCC include dysregulation of the von Hippel-Lindau tumor suppressor protein/hypoxia inducible factor axis, defective ciliogenesis, and aberrant tumor metabolism. 25190700 2014
Entrez Id: 7428
Gene Symbol: VHL
VHL
0.700 AlteredExpression disease BEFREE As the identification of novel pVHL targets might provide insights into pVHL tumour suppressor activity, we performed gene expression microarray analysis in VHL-wild-type and VHL-null renal cell carcinoma (RCC) cell lines. 15824735 2005
Entrez Id: 7428
Gene Symbol: VHL
VHL
0.700 Biomarker disease BEFREE The availability of a RCC cell line from a VHL patient would be useful in studies comparing sporadic RCC with RCC resulting from VHL syndrome; and for determining the relationship or interaction of the RCC gene with the VHL gene to produce a common tumor type. 9209471 1997
Entrez Id: 7428
Gene Symbol: VHL
VHL
0.700 GeneticVariation disease BEFREE The von Hippel-Lindau (VHL) gene is often inactivated (by mutation or promoter hypermethylation) in renal cell carcinoma but the relation to therapeutic outcome is unclear. 18635227 2008
Entrez Id: 7428
Gene Symbol: VHL
VHL
0.700 Biomarker disease BEFREE HIF2A germline-mutation-induced polycythemia in a patient with VHL-associated renal-cell carcinoma. 29172931 2017
Entrez Id: 7428
Gene Symbol: VHL
VHL
0.700 GeneticVariation disease LHGDN Expression of HIF-1 and ubiquitin in conventional renal cell carcinoma: relationship to mutations of the von Hippel-Lindau tumor suppressor gene. 12781449 2003
Entrez Id: 2034
Gene Symbol: EPAS1
EPAS1
0.700 Biomarker disease BEFREE HIF-2α is stabilized in von Hippel-Lindau (VHL)-deficient renal cell carcinoma through mechanisms that require ongoing mRNA translation. 22869144 2013
Entrez Id: 7428
Gene Symbol: VHL
VHL
0.700 Biomarker disease BEFREE For an early diagnosis of VHL, before the occurrence of cancers (especially renal cell carcinoma), it is of huge importance to initiate VHL genetic testing in at-risk patients. 29764331 2019
Entrez Id: 2034
Gene Symbol: EPAS1
EPAS1
0.700 Biomarker disease BEFREE Our findings also suggest that MTHFD2 and HIF-2α form a positive feedforward loop in RCC, promoting metabolic reprograming and tumor growth. 31289360 2019
Entrez Id: 7428
Gene Symbol: VHL
VHL
0.700 Biomarker disease LHGDN Genetic characterization and structural analysis of VHL Spanish families to define genotype-phenotype correlations. 14722919 2004
Entrez Id: 2034
Gene Symbol: EPAS1
EPAS1
0.700 Biomarker disease BEFREE Herein, we provide mechanistic evidence that HIF-2α can be degraded in cytoplasm under hypoxic conditions via the 26S proteasome and that MDM2 is the E3 ligase which induces the hypoxic degradation of HIF-2α in PI-3K-dependent manner in VHL-deficient RCC cells. 25578041 2015
Entrez Id: 2034
Gene Symbol: EPAS1
EPAS1
0.700 Biomarker disease BEFREE A small molecule inhibitor that binds to HIF-2α and blocks dimerization with HIF-1β is in clinical trials for the treatment of renal cell carcinoma. 30625281 2019
Entrez Id: 5728
Gene Symbol: PTEN
PTEN
0.700 AlteredExpression disease BEFREE Relationship between PTEN and Livin expression and malignancy of renal cell carcinomas. 22938441 2012
Entrez Id: 2034
Gene Symbol: EPAS1
EPAS1
0.700 Biomarker disease BEFREE Mutation analysis of hypoxia-inducible factors HIF1A and HIF2A in renal cell carcinoma. 20032376 2009
Entrez Id: 2034
Gene Symbol: EPAS1
EPAS1
0.700 Biomarker disease BEFREE Our data provide insight into the link between HIF2α, the ITPR1-related pathway, and natural immunity and strongly suggest a role for the HIF2α/ITPR1 axis in regulating RCC cell survival. 25297632 2014
Entrez Id: 2034
Gene Symbol: EPAS1
EPAS1
0.700 AlteredExpression disease BEFREE Furthermore, we demonstrate that peroxisome abundance is reduced in VHL-deficient human clear cell renal cell carcinomas with high HIF-2α levels. 25440060 2014
Entrez Id: 7428
Gene Symbol: VHL
VHL
0.700 AlteredExpression disease LHGDN VHL expression in renal cell carcinoma sensitizes to bortezomib (PS-341) through an NF-kappaB-dependent mechanism. 15608669 2005
Entrez Id: 2034
Gene Symbol: EPAS1
EPAS1
0.700 GeneticVariation disease GWASCAT Two correlated variants (r² = 0.99 in controls), rs11894252 (P = 1.8 × 10⁻⁸) and rs7579899 (P = 2.3 × 10⁻⁹), map to EPAS1 on 2p21, which encodes hypoxia-inducible-factor-2 alpha, a transcription factor previously implicated in RCC. 21131975 2011
Entrez Id: 5728
Gene Symbol: PTEN
PTEN
0.700 Biomarker disease CTD_human Spectrum of diverse genomic alterations define non-clear cell renal carcinoma subtypes. 25401301 2015
Entrez Id: 7428
Gene Symbol: VHL
VHL
0.700 Biomarker disease CTD_human These data support the notion of a putative genotoxic effect of TCE leading to VHL gene damage and subsequent occurrence of RCC in highly exposed subjects. 15177666 2004
Entrez Id: 2034
Gene Symbol: EPAS1
EPAS1
0.700 AlteredExpression disease BEFREE Proteomic analysis of signaling network regulation in renal cell carcinomas with differential hypoxia-inducible factor-2α expression. 23940778 2013
Entrez Id: 2034
Gene Symbol: EPAS1
EPAS1
0.700 Biomarker disease BEFREE Cell culture metabolomics analysis was utilized to determined effect of VHL and HIF-1α or HIF-2α on metabolism of renal cell carcinomas (RCC). 26620126 2016
Entrez Id: 5728
Gene Symbol: PTEN
PTEN
0.700 AlteredExpression disease LHGDN [Kidney tumors]. 17593340 2007