Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 652
Gene Symbol: BMP4
BMP4
0.220 Biomarker group BEFREE Disordered expression of the cardiac genes, myl7, vmhc, myh6, bmp4, tbx2b and notch1b, as well as reduced number of myocardial cells and endocardial cells, indicated the collapsed development of ventricle and atrium and failed differentiation of atrioventricular canal (AVC). 29223822 2018
Entrez Id: 650
Gene Symbol: BMP2
BMP2
0.020 AlteredExpression group BEFREE During mammalian heart development, restricted myocardial Bmp2 expression is a key patterning signal for atrioventricular canal specification and the epithelial-mesenchyme transition that gives rise to the valves. 29540665 2018
Entrez Id: 2263
Gene Symbol: FGFR2
FGFR2
0.010 GeneticVariation group LHGDN Endocardial cushion defect in a patient with Crouzon syndrome carrying a mutation in the fibroblast growth factor receptor (FGFR)-2 gene. 17850625 2007
Entrez Id: 9332
Gene Symbol: CD163
CD163
0.020 Biomarker group BEFREE Endoscopy showed segmental colitis and pathology revealed infiltration of large foamy histiocytes CD3-/CD20-/CD68+/CD163+/S100- consistent with ECD. 28617889 2017
Entrez Id: 6271
Gene Symbol: S100A1
S100A1
0.020 Biomarker group BEFREE Endoscopy showed segmental colitis and pathology revealed infiltration of large foamy histiocytes CD3-/CD20-/CD68+/CD163+/S100- consistent with ECD. 28617889 2017
Entrez Id: 6285
Gene Symbol: S100B
S100B
0.020 Biomarker group BEFREE Endoscopy showed segmental colitis and pathology revealed infiltration of large foamy histiocytes CD3-/CD20-/CD68+/CD163+/S100- consistent with ECD. 28617889 2017
Entrez Id: 5308
Gene Symbol: PITX2
PITX2
0.020 AlteredExpression group BEFREE Expression of Pitx2 appears to be repressed in a large portion of the heart ventricle and atrioventricular canal of wild-type mice by a negative feedback mechanism at a time when the gene is still expressed in its other domains. 16835440 2006
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 GeneticVariation group BEFREE Finally, droplet digital PCR using a probe specific for this novel mutation detected the complex BRAF mutation in both the 2000 and 2008 lesions, indicating this case to be ECD with a novel underlying BRAF p.Thr599_Val600delinsArgGlu mutation. 28455460 2017
Entrez Id: 23670
Gene Symbol: CEMIP2
CEMIP2
0.010 Biomarker group BEFREE Finally, we show that alteration of a residue important for HA depolymerization impairs the efficacy of Tmem2 function during AVC development. 31444829 2019
Entrez Id: 650
Gene Symbol: BMP2
BMP2
0.020 AlteredExpression group BEFREE Functional studies in the mouse have shown that a Hey-Bmp2 regulatory circuit restricts Bmp2 expression to presumptive valve myocardium (atrioventricular canal and outflow tract). 21563298 2011
Entrez Id: 11319
Gene Symbol: ECD
ECD
0.020 Biomarker group BEFREE Further, binding of an agonistic antibody (MM12) specific to human TrkB-EJM activated the full-length TrkB and unexpectedly also truncated TrkB lacking ECD (TrkBdelECD365), suggesting that TrkB is activated by attenuating the inhibitory effect of EJM through MM12 binding-induced conformational changes. 31430955 2019
Entrez Id: 51266
Gene Symbol: CLEC1B
CLEC1B
0.010 Biomarker group BEFREE Furthermore, Fc-CLEC2(ECD) treatment improves cytokine profiles and increases both the M2 macrophage population and the genes involved in the oxidation of lipid metabolism in the liver. 26151067 2015
Entrez Id: 6696
Gene Symbol: SPP1
SPP1
0.010 AlteredExpression group BEFREE Furthermore, the osteopontin mRNA decreased following glucocorticoid therapy with xanthogranuloma regression, suggesting that the expression level of osteopontin could be a marker of the disease activity of ECD. 18270430 2008
Entrez Id: 26160
Gene Symbol: IFT172
IFT172
0.210 Biomarker group MGD Genome-wide identification of mouse congenital heart disease loci. 20511334 2010
Entrez Id: 8701
Gene Symbol: DNAH11
DNAH11
0.200 Biomarker group MGD Genome-wide identification of mouse congenital heart disease loci. 20511334 2010
Entrez Id: 54903
Gene Symbol: MKS1
MKS1
0.200 Biomarker group MGD Genome-wide identification of mouse congenital heart disease loci. 20511334 2010
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 GeneticVariation group BEFREE Here, we report a 2-year-old boy, the youngest patient in the literature so far, who was diagnosed with concomitant BRAF mutation-positive LCH and ECD. 28182116 2017
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 GeneticVariation group BEFREE Here, we retrospectively evaluated the clinical and pathologic characteristics, presence of the BRAF V600E mutation, treatment options, and outcomes of Chinese patients diagnosed with ECD at our center. 26858028 2016
Entrez Id: 51230
Gene Symbol: PHF20
PHF20
0.010 Biomarker group BEFREE Higher cell affinity was observed on NANOZR-E when compared with ECD treated 3Y-TZP. 27783470 2017
Entrez Id: 5604
Gene Symbol: MAP2K1
MAP2K1
0.020 GeneticVariation group BEFREE However, at least in the cases of LCH and ECD, there is a very high frequency of activating mutations in MAPK pathway genes, most notably BRAF-V600E, as well as MAP2K1, in LCH and NRAS in ECD. 26637772 2015
Entrez Id: 4893
Gene Symbol: NRAS
NRAS
0.020 GeneticVariation group BEFREE However, at least in the cases of LCH and ECD, there is a very high frequency of activating mutations in MAPK pathway genes, most notably BRAF-V600E, as well as MAP2K1, in LCH and NRAS in ECD. 26637772 2015
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 GeneticVariation group BEFREE Identification of BRAF and other MAPK pathway mutations in biopsies improves ECD diagnosis, allows for development of targeted treatments, and demonstrates that ECD is a neoplastic disorder. 28553668 2017
Entrez Id: 909
Gene Symbol: CD1A
CD1A
0.040 Biomarker group BEFREE Immunohistochemically, the LCH contained CD1a-positive Langerhans cells and the ECD had CD1a-negative, CD68-positive foamy histiocytes. 26466952 2016
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 GeneticVariation group BEFREE IMPLICATIONS FOR PRACTICE: Vemurafenib, an oral monotherapy targeting a mutation in BRAF, is the first U.S. Food and Drug Administration approval for the treatment of Erdheim-Chester disease (ECD). 30120160 2018
Entrez Id: 3553
Gene Symbol: IL1B
IL1B
0.020 Biomarker group BEFREE Importantly, gastrointestinal ECD might exhibit poor response to steroid treatment and other potential treatments including chemotherapy, and biologic treatments targeting IL-1 and TNF-alpha signalling should be considered. 28617889 2017