Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 652
Gene Symbol: BMP4
BMP4
0.220 AlteredExpression group BEFREE pouC Regulates Expression of bmp4 During Atrioventricular Canal Formation in Zebrafish. 30444277 2019
Entrez Id: 652
Gene Symbol: BMP4
BMP4
0.220 Biomarker group BEFREE Disordered expression of the cardiac genes, myl7, vmhc, myh6, bmp4, tbx2b and notch1b, as well as reduced number of myocardial cells and endocardial cells, indicated the collapsed development of ventricle and atrium and failed differentiation of atrioventricular canal (AVC). 29223822 2018
Entrez Id: 652
Gene Symbol: BMP4
BMP4
0.220 Biomarker group MGD
Entrez Id: 26160
Gene Symbol: IFT172
IFT172
0.210 GeneticVariation group BEFREE We identified atrioventricular canal 1 (avc1), a mouse mutation that caused VACTERL association with hydrocephalus, or VACTERL-H. We showed that avc1 is a hypomorphic mutation of intraflagellar transport protein 172 (Ift172), required for ciliogenesis and Hedgehog (Hh) signaling. 21653639 2011
Entrez Id: 26160
Gene Symbol: IFT172
IFT172
0.210 Biomarker group MGD Genome-wide identification of mouse congenital heart disease loci. 20511334 2010
Entrez Id: 9975
Gene Symbol: NR1D2
NR1D2
0.200 Biomarker group MGD De Novo and Rare Variants at Multiple Loci Support the Oligogenic Origins of Atrioventricular Septal Heart Defects. 27058611 2016
Entrez Id: 8701
Gene Symbol: DNAH11
DNAH11
0.200 Biomarker group MGD Genome-wide identification of mouse congenital heart disease loci. 20511334 2010
Entrez Id: 54903
Gene Symbol: MKS1
MKS1
0.200 Biomarker group MGD Genome-wide identification of mouse congenital heart disease loci. 20511334 2010
Entrez Id: 3491
Gene Symbol: CCN1
CCN1
0.200 Biomarker group MGD The matricellular protein CCN1 is essential for cardiac development. 17023674 2006
Entrez Id: 3491
Gene Symbol: CCN1
CCN1
0.200 Biomarker group MGD CYR61 (CCN1) is essential for placental development and vascular integrity. 12446788 2002
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 GeneticVariation group BEFREE The BRAF inhibitor vemurafenib is approved by the U.S. Food and Drug Administration (FDA) for patients with ECD harboring a <i>BRAF</i> V600E mutation. 31740567 2019
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 Biomarker group BEFREE This retrospective case series seeks to redefine the clinicopathologic spectrum of pediatric CNS-JXG family neoplasms in the post-BRAF era, with a revised diagnostic algorithm to include pediatric ECD. 31685033 2019
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 GeneticVariation group BEFREE The <i>BRAF</i><sup>V600E</sup> mutation and BRAF inhibitor responsiveness characterize ∼50% of patients with the non-Langerhans cell histiocytosis (non-LCH) Erdheim-Chester disease (ECD). 31015311 2019
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 Biomarker group BEFREE Treatment with BRAF inhibitors has markedly improved outcomes of ECD; however, this targeted therapy is expensive (estimated annual cost is $50,000). 30630516 2019
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 GeneticVariation group BEFREE The B-Raf proto-oncogeneV600E mutation was not detected in ECD lesions. 31259822 2019
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 GeneticVariation group BEFREE BRAF V600E is the predominant oncogenic driver of L-group histiocytoses, which includes Erdheim-Chester disease (ECD); however, limited data exist on the prevalence of this mutation in sporadic XG family lesions. 31639332 2019
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 Biomarker group BEFREE We review the radiologic hallmarks of ECD and demonstrate the radiologic manifestations of response to combined BRAF and MEK inhibitor treatment. 29485431 2018
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 GeneticVariation group BEFREE The BRAF V600E mutation was detected in both LCH and ECD lesions. 30265230 2018
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 GeneticVariation group BEFREE IMPLICATIONS FOR PRACTICE: Vemurafenib, an oral monotherapy targeting a mutation in BRAF, is the first U.S. Food and Drug Administration approval for the treatment of Erdheim-Chester disease (ECD). 30120160 2018
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 Biomarker group BEFREE In addition, we identified the BRAF status and the HDL phenotype as independent determinants of the aortic involvement in ECD with a potential role of HDL in modulating the infiltration of blood CD14<sup>+</sup> cells into the aorta. 29930009 2018
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 GeneticVariation group BEFREE Patients with BRAF V600-mutant ECD or LCH were enrolled in an "other solid tumor" cohort of the VE-BASKET study, and they were enrolled in the present study. 29188284 2018
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 GeneticVariation group BEFREE Underlying BRAF and other MAPK pathway mutations are identified in approximately 50% of cases of ECD, which aids in diagnosis as well as enables novel targeted treatments. 30474563 2018
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 GeneticVariation group BEFREE • To assess the degree of thoracic involvement in ECD with CT. • BRAF <sup>V600E</sup> mutation has a high association with right coronary artery sheathing. 29736852 2018
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 GeneticVariation group BEFREE Therefore, the patient was determined to have ECD with a typical BRAF V600E mutation, as well as primary myelofibrosis, with the latter diagnosis manifesting clinically over one year after the JAK2 V617F was first detected in ctDNA. 29565699 2018
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 GeneticVariation group BEFREE Finally, droplet digital PCR using a probe specific for this novel mutation detected the complex BRAF mutation in both the 2000 and 2008 lesions, indicating this case to be ECD with a novel underlying BRAF p.Thr599_Val600delinsArgGlu mutation. 28455460 2017