Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3020
Gene Symbol: H3-3A
H3-3A
0.080 GeneticVariation group BEFREE However, in the remaining five cases, in contrast to their associated H3F3A G34W-mutant giant cell tumor, the sarcoma lacked the H3F3A G34W mutation, either entirely or sub-clonally in the samples tested. 31285528 2019
Entrez Id: 3021
Gene Symbol: H3-3B
H3-3B
0.080 GeneticVariation group BEFREE Characterization of Three Novel H3F3A-mutated Giant Cell Tumor Cell Lines and Targeting of Their Wee1 Pathway. 31015476 2019
Entrez Id: 3021
Gene Symbol: H3-3B
H3-3B
0.080 GeneticVariation group BEFREE However, in the remaining five cases, in contrast to their associated H3F3A G34W-mutant giant cell tumor, the sarcoma lacked the H3F3A G34W mutation, either entirely or sub-clonally in the samples tested. 31285528 2019
Entrez Id: 3020
Gene Symbol: H3-3A
H3-3A
0.080 GeneticVariation group BEFREE Characterization of Three Novel H3F3A-mutated Giant Cell Tumor Cell Lines and Targeting of Their Wee1 Pathway. 31015476 2019
Entrez Id: 3021
Gene Symbol: H3-3B
H3-3B
0.080 AlteredExpression group BEFREE Giant cell tumors of bone (GCTBs) are characterized by mononuclear stromal cells and osteoclast-like giant cells; up to 95% have H3F3A gene mutation. 29241742 2018
Entrez Id: 3020
Gene Symbol: H3-3A
H3-3A
0.080 GeneticVariation group BEFREE The identification of H3F3A mutation in giant cell tumour of the clivus and the histological diagnostic algorithm of other clival lesions permit the differential diagnosis in this location. 29609578 2018
Entrez Id: 3020
Gene Symbol: H3-3A
H3-3A
0.080 GeneticVariation group BEFREE H3 histone family member 3A (H3F3A) (G34W/V/R/L) mutations are present in the majority of giant cell tumors (GCTs) of bone and H3 histone family member 3B (H3F3B) (K36M) mutations are present in nearly all chondroblastomas, but are absent in histologic mimics. 29757500 2018
Entrez Id: 3020
Gene Symbol: H3-3A
H3-3A
0.080 AlteredExpression group BEFREE Giant cell tumors of bone (GCTBs) are characterized by mononuclear stromal cells and osteoclast-like giant cells; up to 95% have H3F3A gene mutation. 29241742 2018
Entrez Id: 3021
Gene Symbol: H3-3B
H3-3B
0.080 GeneticVariation group BEFREE H3 histone family member 3A (H3F3A) (G34W/V/R/L) mutations are present in the majority of giant cell tumors (GCTs) of bone and H3 histone family member 3B (H3F3B) (K36M) mutations are present in nearly all chondroblastomas, but are absent in histologic mimics. 29757500 2018
Entrez Id: 3021
Gene Symbol: H3-3B
H3-3B
0.080 GeneticVariation group BEFREE The identification of H3F3A mutation in giant cell tumour of the clivus and the histological diagnostic algorithm of other clival lesions permit the differential diagnosis in this location. 29609578 2018
Entrez Id: 3020
Gene Symbol: H3-3A
H3-3A
0.080 GeneticVariation group BEFREE Point mutations of the H3F3A gene (coding for a histone H3.3 protein) at the Gly34 codon, mostly G34W resulting from a GGG>TGG nucleotide change, have recently been identified in a vast majority of giant cell tumors of bone. 28084336 2017
Entrez Id: 3021
Gene Symbol: H3-3B
H3-3B
0.080 Biomarker group BEFREE H3F3A and H3F3B were found in 85% of giant cell tumors of the bone and 88% of chondroblastomas. 28059095 2017
Entrez Id: 3020
Gene Symbol: H3-3A
H3-3A
0.080 GeneticVariation group BEFREE H3F3A mutation in giant cell tumour of the bone is detected by immunohistochemistry using a monoclonal antibody against the G34W mutated site of the histone H3.3 variant. 28211081 2017
Entrez Id: 3020
Gene Symbol: H3-3A
H3-3A
0.080 Biomarker group BEFREE H3F3A and H3F3B were found in 85% of giant cell tumors of the bone and 88% of chondroblastomas. 28059095 2017
Entrez Id: 3021
Gene Symbol: H3-3B
H3-3B
0.080 GeneticVariation group BEFREE Point mutations of the H3F3A gene (coding for a histone H3.3 protein) at the Gly34 codon, mostly G34W resulting from a GGG>TGG nucleotide change, have recently been identified in a vast majority of giant cell tumors of bone. 28084336 2017
Entrez Id: 3021
Gene Symbol: H3-3B
H3-3B
0.080 GeneticVariation group BEFREE H3F3A mutation in giant cell tumour of the bone is detected by immunohistochemistry using a monoclonal antibody against the G34W mutated site of the histone H3.3 variant. 28211081 2017
Entrez Id: 1435
Gene Symbol: CSF1
CSF1
0.050 GeneticVariation group BEFREE Detection of CSF1 rearrangements deleting the 3' UTR in tenosynovial giant cell tumors. 31469468 2020
Entrez Id: 1435
Gene Symbol: CSF1
CSF1
0.050 Biomarker group BEFREE Massively parallel sequencing of tenosynovial giant cell tumors reveals novel CSF1 fusion transcripts and novel somatic CBL mutations. 31107544 2019
Entrez Id: 8600
Gene Symbol: TNFSF11
TNFSF11
0.050 Biomarker group BEFREE For bone tumors, new drugs are limited to denosumab, a receptor activator of nuclear factor κB ligand (RANKL) inhibitor, for treating giant cell tumors of bone. 29510588 2018
Entrez Id: 8600
Gene Symbol: TNFSF11
TNFSF11
0.050 Biomarker group BEFREE Pathogenesis of Osteosclerotic Change Following Treatment with an Antibody Against RANKL for Giant Cell Tumour of the Bone. 28179326 2017
Entrez Id: 1435
Gene Symbol: CSF1
CSF1
0.050 AlteredExpression group BEFREE Novel CSF1-S100A10 fusion gene and CSF1 transcript identified by RNA sequencing in tenosynovial giant cell tumors. 24604026 2014
Entrez Id: 8600
Gene Symbol: TNFSF11
TNFSF11
0.050 Biomarker group BEFREE Inhibition of RANKL with denosumab may offer therapeutic option for patients not only with giant cell tumors but also with ABCs. 24438319 2014
Entrez Id: 1435
Gene Symbol: CSF1
CSF1
0.050 Biomarker group BEFREE M-CSF, the main ligand for c-fms, is required for osteoclastogenesis and has been already identified as a critical contributor of the pathogenesis of giant cell tumours of bone (GCTs), tumours rich in osteoclasts. 20191615 2010
Entrez Id: 8600
Gene Symbol: TNFSF11
TNFSF11
0.050 AlteredExpression group BEFREE Interleukin-34 is expressed by giant cell tumours of bone and plays a key role in RANKL-induced osteoclastogenesis. 20191615 2010
Entrez Id: 1435
Gene Symbol: CSF1
CSF1
0.050 Biomarker group BEFREE Molecular identification of COL6A3-CSF1 fusion transcripts in tenosynovial giant cell tumors. 17918257 2008