Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 6387
Gene Symbol: CXCL12
CXCL12
0.400 Biomarker group CTD_human
Entrez Id: 3107
Gene Symbol: HLA-C
HLA-C
0.400 Biomarker group CTD_human
Entrez Id: 6347
Gene Symbol: CCL2
CCL2
0.400 Biomarker group CTD_human
Entrez Id: 6349
Gene Symbol: CCL3L1
CCL3L1
0.360 Biomarker group CTD_human
Entrez Id: 7098
Gene Symbol: TLR3
TLR3
0.340 Biomarker group CTD_human
Entrez Id: 6348
Gene Symbol: CCL3
CCL3
0.340 Biomarker group CTD_human
Entrez Id: 1524
Gene Symbol: CX3CR1
CX3CR1
0.330 Biomarker group CTD_human
Entrez Id: 3577
Gene Symbol: CXCR1
CXCR1
0.320 Biomarker group CTD_human
Entrez Id: 6356
Gene Symbol: CCL11
CCL11
0.310 Biomarker group CTD_human
Entrez Id: 3566
Gene Symbol: IL4R
IL4R
0.300 Biomarker group CTD_human
Entrez Id: 3458
Gene Symbol: IFNG
IFNG
0.400 AlteredExpression group BEFREE "Tuberculosis in advanced HIV infection is associated with increased expression of IFNγ and its downstream targets". 29764370 2018
Entrez Id: 9048
Gene Symbol: ARTN
ARTN
0.100 Biomarker group BEFREE <b>Abbreviations:</b> ART: anti-retroviral therapy; Child PIP: Child Healthcare Problem Identification Programme; CCF: congestive cardiac failure; CNS: central nervous system; CoNS: coagulase-negative <i>staphylococci</i>; CSF: cerebrospinal fluid; DNA pcr: deoxyribonucleic acid polymerase chain reaction; ETAT: emergency triage assessment and treatment; LMIC: low- and middle-income countries; MDG: Millennium Development Goals; MRI: magnetic resonance imaging; MRSA: methicillin-resistant <i>Staphylococcus aureus</i>; NAI: non-accidental injury; NTS: non-typhi salmonella; PJP: <i>Pneumocystis jiroveci</i> pneumonia; PSHD: presumed severe HIV disease; QECH: Queen Elizabeth Central Hospital; RHD: rheumatic heart disease; RTA: road traffic accident; TB: tuberculosis; TBM: tuberculous meningitis; WHO: World Health Organization; SAM: severe acute malnutrition. 30451103 2019
Entrez Id: 181
Gene Symbol: AGRP
AGRP
0.100 Biomarker group BEFREE <b>Abbreviations:</b> ART: anti-retroviral therapy; Child PIP: Child Healthcare Problem Identification Programme; CCF: congestive cardiac failure; CNS: central nervous system; CoNS: coagulase-negative <i>staphylococci</i>; CSF: cerebrospinal fluid; DNA pcr: deoxyribonucleic acid polymerase chain reaction; ETAT: emergency triage assessment and treatment; LMIC: low- and middle-income countries; MDG: Millennium Development Goals; MRI: magnetic resonance imaging; MRSA: methicillin-resistant <i>Staphylococcus aureus</i>; NAI: non-accidental injury; NTS: non-typhi salmonella; PJP: <i>Pneumocystis jiroveci</i> pneumonia; PSHD: presumed severe HIV disease; QECH: Queen Elizabeth Central Hospital; RHD: rheumatic heart disease; RTA: road traffic accident; TB: tuberculosis; TBM: tuberculous meningitis; WHO: World Health Organization; SAM: severe acute malnutrition. 30451103 2019
Entrez Id: 1437
Gene Symbol: CSF2
CSF2
0.040 Biomarker group BEFREE <b>Abbreviations:</b> ART: anti-retroviral therapy; Child PIP: Child Healthcare Problem Identification Programme; CCF: congestive cardiac failure; CNS: central nervous system; CoNS: coagulase-negative <i>staphylococci</i>; CSF: cerebrospinal fluid; DNA pcr: deoxyribonucleic acid polymerase chain reaction; ETAT: emergency triage assessment and treatment; LMIC: low- and middle-income countries; MDG: Millennium Development Goals; MRI: magnetic resonance imaging; MRSA: methicillin-resistant <i>Staphylococcus aureus</i>; NAI: non-accidental injury; NTS: non-typhi salmonella; PJP: <i>Pneumocystis jiroveci</i> pneumonia; PSHD: presumed severe HIV disease; QECH: Queen Elizabeth Central Hospital; RHD: rheumatic heart disease; RTA: road traffic accident; TB: tuberculosis; TBM: tuberculous meningitis; WHO: World Health Organization; SAM: severe acute malnutrition. 30451103 2019
Entrez Id: 3918
Gene Symbol: LAMC2
LAMC2
0.020 Biomarker group BEFREE <b>Abbreviations:</b> ART: anti-retroviral therapy; Child PIP: Child Healthcare Problem Identification Programme; CCF: congestive cardiac failure; CNS: central nervous system; CoNS: coagulase-negative <i>staphylococci</i>; CSF: cerebrospinal fluid; DNA pcr: deoxyribonucleic acid polymerase chain reaction; ETAT: emergency triage assessment and treatment; LMIC: low- and middle-income countries; MDG: Millennium Development Goals; MRI: magnetic resonance imaging; MRSA: methicillin-resistant <i>Staphylococcus aureus</i>; NAI: non-accidental injury; NTS: non-typhi salmonella; PJP: <i>Pneumocystis jiroveci</i> pneumonia; PSHD: presumed severe HIV disease; QECH: Queen Elizabeth Central Hospital; RHD: rheumatic heart disease; RTA: road traffic accident; TB: tuberculosis; TBM: tuberculous meningitis; WHO: World Health Organization; SAM: severe acute malnutrition. 30451103 2019
Entrez Id: 4922
Gene Symbol: NTS
NTS
0.010 GeneticVariation group BEFREE <b>Abbreviations:</b> ART: anti-retroviral therapy; Child PIP: Child Healthcare Problem Identification Programme; CCF: congestive cardiac failure; CNS: central nervous system; CoNS: coagulase-negative <i>staphylococci</i>; CSF: cerebrospinal fluid; DNA pcr: deoxyribonucleic acid polymerase chain reaction; ETAT: emergency triage assessment and treatment; LMIC: low- and middle-income countries; MDG: Millennium Development Goals; MRI: magnetic resonance imaging; MRSA: methicillin-resistant <i>Staphylococcus aureus</i>; NAI: non-accidental injury; NTS: non-typhi salmonella; PJP: <i>Pneumocystis jiroveci</i> pneumonia; PSHD: presumed severe HIV disease; QECH: Queen Elizabeth Central Hospital; RHD: rheumatic heart disease; RTA: road traffic accident; TB: tuberculosis; TBM: tuberculous meningitis; WHO: World Health Organization; SAM: severe acute malnutrition. 30451103 2019
Entrez Id: 9048
Gene Symbol: ARTN
ARTN
0.100 Biomarker group BEFREE <b>Introduction</b>: Efficient antiretroviral-treatment (ART) generally allows control of HIV infection. 31304808 2019
Entrez Id: 181
Gene Symbol: AGRP
AGRP
0.100 Biomarker group BEFREE <b>Introduction</b>: Efficient antiretroviral-treatment (ART) generally allows control of HIV infection. 31304808 2019
Entrez Id: 56477
Gene Symbol: CCL28
CCL28
0.020 GeneticVariation group BEFREE * CDC recently evaluated the evidence and the updated WHO guidance on the risk for human immunodeficiency virus (HIV) acquisition among women using hormonal contraception.<sup>†</sup> After careful review, CDC adopted the updated WHO guidance for inclusion in the U.S. MEC guidance; this guidance states that the advantages of progestin-only injectable contraceptive use (including depot medroxyprogesterone acetate [DMPA]) by women at high risk for HIV infection outweigh the theoretical or proven risks (U.S. MEC category 2). 28934178 2017
Entrez Id: 9048
Gene Symbol: ARTN
ARTN
0.100 Biomarker group BEFREE 176 HIV-1/HCV co-infected patients received anti-HCV DAA treatment together with ART regimens for HIV infection. 30203381 2018
Entrez Id: 181
Gene Symbol: AGRP
AGRP
0.100 Biomarker group BEFREE 176 HIV-1/HCV co-infected patients received anti-HCV DAA treatment together with ART regimens for HIV infection. 30203381 2018
Entrez Id: 23583
Gene Symbol: SMUG1
SMUG1
0.020 Biomarker group BEFREE 18F-FDG-PET/CT imaging of uterine cervical cancer recurrence in women with and without HIV infection. 31089075 2019
Entrez Id: 2638
Gene Symbol: GC
GC
0.060 Biomarker group BEFREE 30.2% of patients with the acquired immunodeficiency syndrome (AIDS) were homozygous for Gc 1 fast (Gc 1f) compared with 0.8% of controls (p less than 0.0001); patients with other clinical manifestations of HIV infection were also more likely than controls to have Gc 1f. 2883392 1987
Entrez Id: 1234
Gene Symbol: CCR5
CCR5
0.100 AlteredExpression group BEFREE HIV infection in Africa is associated with immune activation and a cytokine profile that stimulates CCR5 expression. 11061648 2000
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.100 Biomarker group BEFREE HIV infection and aging: enhanced Interferon- and Tumor Necrosis Factor-alpha production by the CD8+ CD28- T subset. 11696237 2001