Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 94025
Gene Symbol: MUC16
MUC16
0.010 Biomarker group BEFREE This enrichment of specific antigen responses for fucosylated bisecting glycoforms and subsequent association with MUC16 suggests the immune response has the potential to direct specific epitope responses to localize to the glycocalyx through interaction with this specific mucin.<b>Importance</b> Understanding how antibodies are distributed in the mucosal environment is valuable for development of a vaccine to block HIV infection. 31776284 2020
Entrez Id: 6392
Gene Symbol: SDHD
SDHD
0.010 Biomarker group BEFREE These differential associations of HIV infection and CD4 count with PGL-1 and LID-1 have implications for M leprae immunodiagnostic tools and require replication. 31757558 2020
Entrez Id: 100616496
Gene Symbol: ERVW-4
ERVW-4
0.010 GeneticVariation group BEFREE New York City (NYC) HIV molecular surveillance data from 2010 to 2013 were used to build a model to predict the probability that the partial pol gene of the virus of a person with a transmissible HIV viral load (>1500 copies/ml) would be genetically similar to that of a person with a new HIV infection (diagnosis at stage 0 or 1 according to the revised Centers for Disease Control and Prevention classification system). 31794522 2020
Entrez Id: 59307
Gene Symbol: SIGIRR
SIGIRR
0.010 AlteredExpression group BEFREE Our main objective was to investigate how production of the cytokine and expression of SIGIRR on immune cells is regulated in HIV infection. 31149943 2019
Entrez Id: 1908
Gene Symbol: EDN3
EDN3
0.010 Biomarker group BEFREE Moreover, the expression levels of the genes including ACLY, ALDH18A1, HADHA, and YARS in the PBMCs tissue and HBEGF, PKN3, DEGS2, and EDN3 in the fat tissue were found to be different in the HIV-infected patients, which can be considered as new biomarkers for HIV infection. 31317550 2019
Entrez Id: 8664
Gene Symbol: EIF3D
EIF3D
0.010 Biomarker group BEFREE The current data highlight the importance of eIF3d in HIV infection by inhibiting CD8+ T cell function and promoting viral replication. 31118081 2019
Entrez Id: 3502
Gene Symbol: IGHG3
IGHG3
0.010 Biomarker group BEFREE HIV infection drives IgM and IgG3 subclass bias in Plasmodium falciparum-specific and total immunoglobulin concentration in Western Kenya. 31470903 2019
Entrez Id: 7389
Gene Symbol: UROD
UROD
0.010 GeneticVariation group BEFREE Porphyria cutanea tarda (PCT) is the most common human porphyria, due to hepatic deficiency of uroporphyrinogen decarboxylase (UROD), which is acquired in the presence of iron overload and various susceptibility factors, such as alcohol abuse, smoking, hepatitis C virus (HCV) infection, HIV infection, iron overload with HFE gene mutations, use of estrogens, and UROD mutation. 30683557 2019
Entrez Id: 29949
Gene Symbol: IL19
IL19
0.010 GeneticVariation group BEFREE In the multivariate analysis adjusted for age, sex, infection route, ethnic origin, hepatitis co-infection and HIV infection length, the AA genotype of the SNP rs2430561 in IFNγ (OR:2.01[1.13-3.56], p = 0.017) and the TT genotype of polymorphism rs2243191 in IL19 (OR:2.58 [1.17-5.68], p = 0.019) showed significant association with the INR status. 31386862 2019
Entrez Id: 2932
Gene Symbol: GSK3B
GSK3B
0.010 AlteredExpression group BEFREE Together, these results suggest that the effects of Tat on OL viability are dependent on CaMKIIβ-GSK3β interactions, and that increasing CaMKIIβ activity is a potential approach for limiting OL/myelin injury with HIV infection. 30674062 2019
Entrez Id: 6403
Gene Symbol: SELP
SELP
0.010 Biomarker group BEFREE Both serum CD40L and DKK-1 were significantly higher in HIV-infected patients than in the HIV-negative controls (P < 0.001), while soluble P-selectin showed no significant between-group difference (P = 0.133), reflecting the role of HIV infection in CVD. 31424619 2019
Entrez Id: 3643
Gene Symbol: INSR
INSR
0.010 Biomarker group BEFREE Release of Soluble Insulin Receptor From Neurons by Cerebrospinal Fluid From Patients With Neurocognitive Dysfunction and HIV Infection. 30972014 2019
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.010 AlteredExpression group BEFREE Molecular analysis showed that H3K27me3, Ezh2, MeCP2, and Tat all exhibited a similar bimodal expression kinetics in the course of HIV infection and latency in astrocytes, although H3K27me3, Ezh2, and MeCP2 were expressed higher in Tat-expressing astrocytes and their expression were peaked immediately preceding Tat expression. 31020497 2019
Entrez Id: 407007
Gene Symbol: MIR222
MIR222
0.010 AlteredExpression group BEFREE Our results demonstrate that HIV infection modifies the expression of miR-20a-5p and miR-222-3p in women with GDM. 31111446 2019
Entrez Id: 8848
Gene Symbol: TSC22D1
TSC22D1
0.010 Biomarker group BEFREE Suggestive interaction with HIV infection status was found at cg17862404 (TSC22D1). 30649532 2019
Entrez Id: 64218
Gene Symbol: SEMA4A
SEMA4A
0.010 AlteredExpression group BEFREE Here, we demonstrate elevated levels of Sema4A in the cerebrospinal fluid and serum of people with HIV infection. 30736794 2019
Entrez Id: 8565
Gene Symbol: YARS1
YARS1
0.010 Biomarker group BEFREE Moreover, the expression levels of the genes including ACLY, ALDH18A1, HADHA, and YARS in the PBMCs tissue and HBEGF, PKN3, DEGS2, and EDN3 in the fat tissue were found to be different in the HIV-infected patients, which can be considered as new biomarkers for HIV infection. 31317550 2019
Entrez Id: 23640
Gene Symbol: HSPBP1
HSPBP1
0.010 Biomarker group BEFREE In the acute phase, HspBP1 became significantly elevated 15 days after HIV infection. 30786116 2019
Entrez Id: 10425
Gene Symbol: ARIH2
ARIH2
0.010 Biomarker group BEFREE Furthermore, we show that ARIH2 cooperates with CRL5 to prime other cellular substrates for polyubiquitination, suggesting this may represent a general mechanism beyond HIV infection and APOBEC3 degradation. 31253590 2019
Entrez Id: 100996266
Gene Symbol: COMETT
COMETT
0.010 Biomarker group BEFREE HIV-1 polymerase sequences reported to the National HIV Surveillance System for persons in 17 U.S. states with HIV infection diagnosed during 2008-2016 were subtyped using COMET, an automated subtyping tool, and National HIV Surveillance System demographic data were analyzed. 30961993 2019
Entrez Id: 64919
Gene Symbol: BCL11B
BCL11B
0.010 Biomarker group BEFREE HIV brain latency as measured by CSF BcL11b relates to disrupted brain cellular energy in virally suppressed HIV infection. 30475266 2019
Entrez Id: 7249
Gene Symbol: TSC2
TSC2
0.010 Biomarker group BEFREE The lateral flow urine lipoarabinomannan (LF-LAM) assay Alere Determine™ TB LAM Ag is recommended by the World Health Organization (WHO) to help detect active tuberculosis in HIV-positive people with severe HIV disease. 31633805 2019
Entrez Id: 10561
Gene Symbol: IFI44
IFI44
0.010 Biomarker group BEFREE We show that very early in infection, HIV-1 suppresses peripheral type I interferon (IFN) and interferon-stimulated gene (ISG) responses, including the HIV-1 restriction factor IFI44. 30867315 2019
Entrez Id: 57823
Gene Symbol: SLAMF7
SLAMF7
0.010 Biomarker group BEFREE We also noted that SLAMF7 was sensitive to IFN-⍺ stimulation, a factor elevated during HIV infection. 30530590 2019
Entrez Id: 22943
Gene Symbol: DKK1
DKK1
0.010 Biomarker group BEFREE Both serum CD40L and DKK-1 were significantly higher in HIV-infected patients than in the HIV-negative controls (P < 0.001), while soluble P-selectin showed no significant between-group difference (P = 0.133), reflecting the role of HIV infection in CVD. 31424619 2019