Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 6530
Gene Symbol: SLC6A2
SLC6A2
0.010 Biomarker disease BEFREE Our aims were: (1) to compare the prevalence of polymorphisms of alpha 2 (alpha(2)) adrenoceptors, norepinephrine transporter, and serotonin transporter protein (soluble carrier protein member 4 (SLC6A4)) promoter in patients with lower functional gastrointestinal disorders (FGID) and in healthy controls; and (2) to test associations of these genetic variations with symptoms of IBS and high somatic symptom scores. 15138209 2004
Entrez Id: 5341
Gene Symbol: PLEK
PLEK
0.010 Biomarker disease BEFREE We have now established the PsiNCF1 to NCF1 ratio for a significant number of IBD patients (n = 488) and control subjects (n = 181) and show that there is no statistically significant difference between the frequency of the 1:1 ratio in CD (11.2%) or UC (12.2%) patients and controls (13.4%). 15626894 2004
Entrez Id: 3621
Gene Symbol: ING1
ING1
0.010 Biomarker disease BEFREE We have now established the PsiNCF1 to NCF1 ratio for a significant number of IBD patients (n = 488) and control subjects (n = 181) and show that there is no statistically significant difference between the frequency of the 1:1 ratio in CD (11.2%) or UC (12.2%) patients and controls (13.4%). 15626894 2004
Entrez Id: 55968
Gene Symbol: NSFL1C
NSFL1C
0.010 Biomarker disease BEFREE We have now established the PsiNCF1 to NCF1 ratio for a significant number of IBD patients (n = 488) and control subjects (n = 181) and show that there is no statistically significant difference between the frequency of the 1:1 ratio in CD (11.2%) or UC (12.2%) patients and controls (13.4%). 15626894 2004
Entrez Id: 4524
Gene Symbol: MTHFR
MTHFR
0.010 GeneticVariation disease BEFREE The aim of this study was to evaluate the prevalence of factor V Leiden, prothrombin G20210A and methylene tetrahydrofolate reductase (MTHFR) gene mutations in IBD patients followed in our outpatient clinic. 16249980 2004
Entrez Id: 3586
Gene Symbol: IL10
IL10
0.400 GeneticVariation disease BEFREE Possession of a high producer TNF-alpha and a low producer IL-10 genotype were significantly more prevalent in IBS (9%) versus controls (3%, p= 0.035; OR 3.11, 95% CI 1.03-9.36) and in diarrhea (20%) compared to other IBS subtypes (<4%, p= 0.026). 16279907 2005
Entrez Id: 3586
Gene Symbol: IL10
IL10
0.400 GeneticVariation disease BEFREE Interleukin-10 polymorphisms in Spanish patients with IBD. 16043989 2005
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.100 GeneticVariation disease BEFREE Role of tumor necrosis factor-alpha and interleukin-10 gene polymorphisms in irritable bowel syndrome. 16279907 2005
Entrez Id: 64127
Gene Symbol: NOD2
NOD2
0.070 GeneticVariation disease BEFREE Variants of CARD15 are associated with an aggressive clinical course of Crohn's disease--an IG-IBD study. 15654786 2005
Entrez Id: 50608
Gene Symbol: IBD4
IBD4
0.010 GeneticVariation disease BEFREE The IBD international genetics consortium provides further evidence for linkage to IBD4 and shows gene-environment interaction. 15674107 2005
Entrez Id: 6556
Gene Symbol: SLC11A1
SLC11A1
0.010 GeneticVariation disease BEFREE IBD subjects were re-categorized at the sub-disease phenotypic level to characterize possible SLC11A1 genotype-phenotype correlations. 15757519 2005
Entrez Id: 4846
Gene Symbol: NOS3
NOS3
0.210 AlteredExpression disease BEFREE Effect of IBD sera on expression of inducible and endothelial nitric oxide synthase in human umbilical vein endothelial cells. 16586542 2006
Entrez Id: 6532
Gene Symbol: SLC6A4
SLC6A4
0.100 Biomarker disease BEFREE A significant association was observed between the SERT polymorphism and IBS, especially diarrhoea-predominant IBS, suggesting that the SERT gene is a potential candidate gene involved in IBS in Korea. 17040410 2006
Entrez Id: 3359
Gene Symbol: HTR3A
HTR3A
0.070 Biomarker disease LHGDN Do polymorphisms in the human 5-HT3 genes contribute to pathological phenotypes? 17052218 2006
Entrez Id: 64127
Gene Symbol: NOD2
NOD2
0.070 GeneticVariation disease BEFREE The purpose of this study was to carry out a CARD15 sequence analysis in a large single-center IBD cohort and to investigate the impact of different genotypes on disease phenotypes. 17101573 2006
Entrez Id: 144125
Gene Symbol: OR2AG1
OR2AG1
0.040 Biomarker disease BEFREE 5-HT3 receptors are known to be involved in mediation of nausea/emesis caused by chemo/radio-therapy and anaesthesia, and more recently have also been found to be involved in irritable bowel syndrome. 17052218 2006
Entrez Id: 9231
Gene Symbol: DLG5
DLG5
0.020 GeneticVariation disease BEFREE DLG5 R30Q is not associated with IBD in Hungarian IBD patients but predicts clinical response to steroids in Crohn's disease. 16670524 2006
Entrez Id: 50941
Gene Symbol: IBD5
IBD5
0.010 GeneticVariation disease BEFREE Contribution of IBD5 locus to clinical features of IBD patients. 16454837 2006
Entrez Id: 3363
Gene Symbol: HTR7
HTR7
0.210 Biomarker disease RGD The aim of this study was to investigate the role of the 5-HT(7) receptor in the pathogenesis of IBS. 18167178 2007
Entrez Id: 6532
Gene Symbol: SLC6A4
SLC6A4
0.100 GeneticVariation disease LHGDN This study investigates the association of psychological symptoms with the distribution of two serotonin transporter gene (SERT) polymorphisms, located in the promoter region (5-HTTLPR) and in intron 2 (STin2 VNTR), in patients with irritable bowel syndrome (IBS). 17909168 2007
Entrez Id: 6532
Gene Symbol: SLC6A4
SLC6A4
0.100 GeneticVariation disease BEFREE This study investigates the association of psychological symptoms with the distribution of two serotonin transporter gene (SERT) polymorphisms, located in the promoter region (5-HTTLPR) and in intron 2 (STin2 VNTR), in patients with irritable bowel syndrome (IBS). 17909168 2007
Entrez Id: 27034
Gene Symbol: ACAD8
ACAD8
0.100 Biomarker disease BEFREE To compare phenotype and course of disease between IBD patients with a first-degree relative with IBD and sporadic cases in a population-based cohort followed prospectively for 5 yr. 17573793 2007
Entrez Id: 6532
Gene Symbol: SLC6A4
SLC6A4
0.100 AlteredExpression disease BEFREE We found normal colonic mucosal expression of SLC6A4 in diarrhea (IBS-D)- or constipation-predominant IBS (IBS-C). 17241856 2007
Entrez Id: 6532
Gene Symbol: SLC6A4
SLC6A4
0.100 GeneticVariation disease BEFREE However, the allele frequency of the short (S) allele of the 5-HTT LPR polymorphism was greater in those with mixed-IBS compared with controls (68%vs 45%, P < 0.05). 17564628 2007
Entrez Id: 7442
Gene Symbol: TRPV1
TRPV1
0.100 Biomarker disease BEFREE Moreover, emerging data indicate that TRPV1 antagonists could also be useful in treating disorders other than pain, such as urinary urge incontinence, chronic cough and irritable bowel syndrome. 17464295 2007