Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 1297
Gene Symbol: COL9A1
COL9A1
0.700 GeneticVariation disease BEFREE However, the clinical spectrum of patients with COL9A1 variants can also include multiple epiphyseal dysplasia, as well as non-syndromic HL that was observed in one previously reported proband. 31315069 2019
Entrez Id: 1297
Gene Symbol: COL9A1
COL9A1
0.700 GeneticVariation disease BEFREE PSACH and the largest proportion of autosomal dominant MED (AD-MED) results from mutations in cartilage oligomeric matrix protein (COMP); however, AD-MED is genetically heterogenous and can also result from mutations in matrilin-3 (MATN3) and type IX collagen (COL9A1, COL9A2, and COL9A3). 21922596 2012
Entrez Id: 1297
Gene Symbol: COL9A1
COL9A1
0.700 GeneticVariation disease BEFREE TSP-5 is of interest because mutations in the gene cause two skeletal dysplasias, pseudoachondroplasia (PSACH) and multiple epiphyseal dysplasia (MED/EDM1). 18193163 2008
Entrez Id: 1297
Gene Symbol: COL9A1
COL9A1
0.700 GeneticVariation disease BEFREE Mutations in cartilage oligomeric matrix protein (COMP) cause two skeletal dysplasias, pseudoachondroplasia (PSACH) and multiple epiphyseal dysplasia (MED/EDM1). 17200202 2007
Entrez Id: 1297
Gene Symbol: COL9A1
COL9A1
0.700 GeneticVariation disease BEFREE We describe a Japanese family with an autosomal dominant multiple epiphyseal dysplasia (MED EDM2) showing significant phenotypic diversity among the five affected members. 16440132 2006
Entrez Id: 1297
Gene Symbol: COL9A1
COL9A1
0.700 Biomarker disease GENOMICS_ENGLAND Six genes involved in MED, COMP, MATN3, COL9A1, COL9A2, COL9A3, and DTDST have been identified; however, the presence of additional disease genes has been reported, and the detection rate for mutations in known genes accounts for no more than 50% of patients with MED in Western populations. 16691584 2006
Entrez Id: 1297
Gene Symbol: COL9A1
COL9A1
0.700 GeneticVariation disease BEFREE Over 70 mutations in the cartilage oligomeric matrix protein (COMP), a large extracellular pentameric glycoprotein synthesized by chondrocytes, have been identified as causing two skeletal dysplasias: multiple epiphyseal dysplasia (MED/EDM1), and a dwarfing condition, pseudoachondroplasia (PSACH). 16514635 2006
Entrez Id: 1297
Gene Symbol: COL9A1
COL9A1
0.700 Biomarker disease CTD_human A new autosomal recessive form of Stickler syndrome is caused by a mutation in the COL9A1 gene. 16909383 2006
Entrez Id: 1297
Gene Symbol: COL9A1
COL9A1
0.700 GeneticVariation disease BEFREE More than 60 unique COMP mutations have been identified as causing two skeletal dysplasias, pseudoachondroplasia (PSACH) and multiple epiphyseal dysplasia (MED/EDM1). 15694129 2005
Entrez Id: 1297
Gene Symbol: COL9A1
COL9A1
0.700 GeneticVariation disease BEFREE Mutations in the COMP gene cause two dominantly inherited skeletal dysplasias, pseudoachondroplasia (PSACH) and Multiple Epiphyseal Dysplasia (MED/EDM1). 15183431 2004
Entrez Id: 1297
Gene Symbol: COL9A1
COL9A1
0.700 GeneticVariation disease BEFREE Our study provides evidence that at least another locus, distinct from COL9A1, is involved in autosomal dominant MED. 11528506 2001
Entrez Id: 1297
Gene Symbol: COL9A1
COL9A1
0.700 Biomarker disease CTD_human Recombination was observed between COL9A1, COL9A2, COL9A3, and COMP and the MED phenotype in two of the families, and between COL9A2, COL9A3, and COMP and the phenotype in the other two families. 11565064 2001
Entrez Id: 1297
Gene Symbol: COL9A1
COL9A1
0.700 GeneticVariation disease BEFREE Mutations causing MED have now been identified in five other genes (COL9A1, COL9A2, COL9A3, DTDST, and MATN3), making MED one of the most genetically heterogeneous disorders. 11891674 2001
Entrez Id: 1297
Gene Symbol: COL9A1
COL9A1
0.700 GeneticVariation disease BEFREE A genomewide screen of family with autosomal-dominant MED not linked to the EDM1-3 genes provides significant genetic evidence for a MED locus on the short arm of chromosome 2 (2p24-p23), and a search for candidate genes identified MATN3 (ref. 11479597 2001
Entrez Id: 1297
Gene Symbol: COL9A1
COL9A1
0.700 GeneticVariation disease BEFREE The results show that mutations in COL9A1 can cause MED, but they also suggest that mutations in COL9A1, COL9A2, COL9A3, COMP, and DTDST are not the major causes of MED and that there exists at least one additional locus. 11565064 2001
Entrez Id: 1297
Gene Symbol: COL9A1
COL9A1
0.700 Biomarker disease HPO
Entrez Id: 4148
Gene Symbol: MATN3
MATN3
0.500 GeneticVariation disease BEFREE Multiple epiphyseal dysplasia (EDM5) is a genetic skeletal condition and a classic example of an intracellular protein aggregation disease, whereby mutant matrilin-3 forms large insoluble aggregates in the ER lumen, resulting in a specific 'disease signature' of increased expression of chaperones and foldases, and alternative splicing of the UPR effector XBP1. 31260448 2019
Entrez Id: 1836
Gene Symbol: SLC26A2
SLC26A2
0.500 GeneticVariation disease BEFREE One of the affected family members had a double-layered patella, which is frequently seen in patients with autosomal recessive MED caused by DTDST mutations and sporadically in the dominant form of MED caused by COL9A2 defect. 30740902 2019
Entrez Id: 1836
Gene Symbol: SLC26A2
SLC26A2
0.500 GeneticVariation disease BEFREE Pathogenic sequence variants in the solute carrier family 26 member 2 (SLC26A2) gene result in lethal (achondrogenesis Ib and atelosteogenesis II) and non-lethal (diastrophic dysplasia and recessive multiple epiphyseal dysplasia, rMED) chondrodysplasias. 30423444 2019
Entrez Id: 4148
Gene Symbol: MATN3
MATN3
0.500 Biomarker disease BEFREE Our data highlights the importance of detection and careful characterization of intragenic duplication CNVs, presenting them as a novel and very rare genetic mechanism in IFT81-related Jeune syndrome and MATN3-related MED. 30080953 2018
Entrez Id: 4148
Gene Symbol: MATN3
MATN3
0.500 GeneticVariation disease BEFREE We transfected these contructs into the COS-1 or MCT cells, and the results revealed that the HOA-related matrilin-3 mutation (T298M) leads to a high expression level of growth arrest DNA damage-inducible gene 153 (GADD153, also known as CHOP; an endoplasmic reticulum stress marker), as shown by western blot analysis and does not significantly affect protein secretion, as shown by immunofluorescence staining; however, osteochondroplasia, i.e., MED-related (R116W) and SEMD-related (C299S) mutations lead to both high levels of GADD153 expression and protein trafficking into the cytoplasm and form multiple vacuoles in cells, which in turn leads to insufficient protein secretion. 26499313 2015
Entrez Id: 1836
Gene Symbol: SLC26A2
SLC26A2
0.500 GeneticVariation disease BEFREE The homozygous A2092T (T689S) mutation could be one of the mutations in the DTDST gene causing MED. 23934641 2014
Entrez Id: 4148
Gene Symbol: MATN3
MATN3
0.500 Biomarker disease BEFREE We demonstrate that Armet and Creld2 are genotype-specific ER stress response proteins with substrate specificities, and that aggregation of mutant matrilin-3 is a key disease trigger in MED that could be exploited as a potential therapeutic target. 23956175 2013
Entrez Id: 1836
Gene Symbol: SLC26A2
SLC26A2
0.500 Biomarker disease GENOMICS_ENGLAND Pseudoachondroplasia and multiple epiphyseal dysplasia: a 7-year comprehensive analysis of the known disease genes identify novel and recurrent mutations and provides an accurate assessment of their relative contribution. 21922596 2012
Entrez Id: 4148
Gene Symbol: MATN3
MATN3
0.500 GeneticVariation disease BEFREE PSACH and the largest proportion of autosomal dominant MED (AD-MED) results from mutations in cartilage oligomeric matrix protein (COMP); however, AD-MED is genetically heterogenous and can also result from mutations in matrilin-3 (MATN3) and type IX collagen (COL9A1, COL9A2, and COL9A3). 21922596 2012