Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 2261
Gene Symbol: FGFR3
FGFR3
0.120 Biomarker disease HPO
Entrez Id: 5573
Gene Symbol: PRKAR1A
PRKAR1A
0.110 Biomarker disease HPO
Entrez Id: 9772
Gene Symbol: TMEM94
TMEM94
0.100 CausalMutation disease CLINVAR
Entrez Id: 2737
Gene Symbol: GLI3
GLI3
0.100 Biomarker disease HPO
Entrez Id: 2132
Gene Symbol: EXT2
EXT2
0.100 Biomarker disease BEFREE These findings: 1) confirm previous observations of 8q24.1 karyotypic anomalies in sporadic osteochondroma, 2) reveal the presence of somatic chromosomal anomalies in hereditary osteochondromata, 3) suggest that similar to hereditary lesions, sporadic osteochondromas also are genetically heterogeneic (involvement of both 8q24.1 and 11p11-12), and 4) support the hypothesis that loss or mutation of EXT1 and EXT2, two putative tumor suppressor genes, may be important in the pathogenesis of sporadic as well as hereditary osteochondromata. 9576285 1998
Entrez Id: 2131
Gene Symbol: EXT1
EXT1
0.100 GeneticVariation disease BEFREE These findings: 1) confirm previous observations of 8q24.1 karyotypic anomalies in sporadic osteochondroma, 2) reveal the presence of somatic chromosomal anomalies in hereditary osteochondromata, 3) suggest that similar to hereditary lesions, sporadic osteochondromas also are genetically heterogeneic (involvement of both 8q24.1 and 11p11-12), and 4) support the hypothesis that loss or mutation of EXT1 and EXT2, two putative tumor suppressor genes, may be important in the pathogenesis of sporadic as well as hereditary osteochondromata. 9576285 1998
Entrez Id: 2131
Gene Symbol: EXT1
EXT1
0.100 Biomarker disease BEFREE Recent studies on the physiological function of EXT genes are reviewed and implications for osteochondroma 'cell-of-origin' theories are discussed. 10398153 1999
Entrez Id: 2132
Gene Symbol: EXT2
EXT2
0.100 GeneticVariation disease BEFREE EXT1- and EXT2-mutation analysis was performed in a total of 34 sporadic and hereditary osteochondromas and secondary peripheral chondrosarcomas. 10441575 1999
Entrez Id: 2131
Gene Symbol: EXT1
EXT1
0.100 GeneticVariation disease BEFREE Furthermore, LOH was almost exclusively found at the EXT1 locus in 5 of 14 osteochondromas. 10441575 1999
Entrez Id: 2132
Gene Symbol: EXT2
EXT2
0.100 GeneticVariation disease BEFREE In this study, we have characterized exostosis chondrocytes from three patients with HME (one with EXT1 and two with EXT2 germline mutations) and from one individual with a non-HME, isolated exostosis. 10750558 2000
Entrez Id: 2131
Gene Symbol: EXT1
EXT1
0.100 GeneticVariation disease BEFREE In this study, we have characterized exostosis chondrocytes from three patients with HME (one with EXT1 and two with EXT2 germline mutations) and from one individual with a non-HME, isolated exostosis. 10750558 2000
Entrez Id: 2261
Gene Symbol: FGFR3
FGFR3
0.120 Biomarker disease BEFREE The expression of PTHrP, PTHrP-receptor, Bcl-2, FGF2, FGFR1, FGFR3, and p21 is investigated by immunohistochemistry in osteochondromas (n = 24) and peripheral (n = 29) and central (n = 20) chondrosarcomas. 11140704 2000
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.040 AlteredExpression disease BEFREE Up-regulation of PTHrP and Bcl-2 characterizes malignant transformation of osteochondroma because PTHrP and Bcl-2 expression is significantly higher in borderline and grade I peripheral chondrosarcomas compared with osteochondromas. 11140704 2000
Entrez Id: 5744
Gene Symbol: PTHLH
PTHLH
0.020 AlteredExpression disease BEFREE The expression of PTHrP, PTHrP-receptor, Bcl-2, FGF2, FGFR1, FGFR3, and p21 is investigated by immunohistochemistry in osteochondromas (n = 24) and peripheral (n = 29) and central (n = 20) chondrosarcomas. 11140704 2000
Entrez Id: 2132
Gene Symbol: EXT2
EXT2
0.100 Biomarker disease BEFREE Among the four loci, the exostosis type 1 gene (EXT1) and type 2 gene (EXT2) have been cloned. 11170095 2001
Entrez Id: 2131
Gene Symbol: EXT1
EXT1
0.100 GeneticVariation disease BEFREE Among the four loci, the exostosis type 1 gene (EXT1) and type 2 gene (EXT2) have been cloned. 11170095 2001
Entrez Id: 2254
Gene Symbol: FGF9
FGF9
0.010 Biomarker disease BEFREE Role of FGF9 and FGF receptor 3 in osteochondroma formation. 11518409 2001
Entrez Id: 650
Gene Symbol: BMP2
BMP2
0.010 Biomarker disease BEFREE This is the first study to provide observational evidence of the involvement of BMP-2 signaling in the pathogenesis of cartilage cap of osteochondroma. and suggests the role of BMP-2 in the growth of cartilage cap in osteochondroma. 11781009 2001
Entrez Id: 2131
Gene Symbol: EXT1
EXT1
0.100 GeneticVariation disease BEFREE DNA from the HME exostoses demonstrated heterozygous germline EXT1 or EXT2 mutations, and DNA from one solitary exostosis demonstrated a somatic EXT1 mutation. 12110435 2002
Entrez Id: 2131
Gene Symbol: EXT1
EXT1
0.100 GeneticVariation disease BEFREE Linkage analysis has identified a family of EXT genes which, if mutated, can lose heterozygosity and potentially cause osteochondromas. 12151882 2002
Entrez Id: 2131
Gene Symbol: EXT1
EXT1
0.100 Biomarker disease BEFREE This provides limited support for the two-hit hypothesis involving the EXT1 and EXT2 genes for the development of an exostosis. 12239711 2002
Entrez Id: 2132
Gene Symbol: EXT2
EXT2
0.100 Biomarker disease BEFREE This provides limited support for the two-hit hypothesis involving the EXT1 and EXT2 genes for the development of an exostosis. 12239711 2002
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.040 Biomarker disease BEFREE Bcl-2 is a good diagnostic marker that can be used in the distinction between osteochondroma and low-grade secondary peripheral chondrosarcoma. 12271817 2002
Entrez Id: 2131
Gene Symbol: EXT1
EXT1
0.100 GeneticVariation disease BEFREE These findings indicate that a significant subset of osteochondromas harbor genetic aberrations at the EXT1 locus and suggest that loss or mutation of EXT1 plays an important role in the pathogenesis of sporadic as well as hereditary osteochondromas. 12393280 2002
Entrez Id: 11258
Gene Symbol: DCTN3
DCTN3
0.010 Biomarker disease BEFREE Recurring breakpoints of 1p13 approximately p22 in osteochondroma. 12505252 2002