Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3172
Gene Symbol: HNF4A
HNF4A
0.010 Biomarker disease BEFREE A novel mutation in intron 9-exon 10 boundary of the GCK gene was detected in a male patient with clinical features of GCK-MODY and situs inversus. 30086370 2018
Entrez Id: 3569
Gene Symbol: IL6
IL6
0.010 AlteredExpression disease BEFREE Acute SIV infection of the brain leads to upregulation of IL6 and interferon-regulated genes: expression patterns throughout disease progression and impact on neuroAIDS. 15579284 2004
Entrez Id: 2214
Gene Symbol: FCGR3A
FCGR3A
0.010 AlteredExpression disease BEFREE Acute SIV infection was associated with increased FcγRIII expression which subsequently declined with disease progression. 31333668 2019
Entrez Id: 2215
Gene Symbol: FCGR3B
FCGR3B
0.010 AlteredExpression disease BEFREE Acute SIV infection was associated with increased FcγRIII expression which subsequently declined with disease progression. 31333668 2019
Entrez Id: 3700
Gene Symbol: ITIH4
ITIH4
0.050 Biomarker disease BEFREE Although HIV/SIV infections result in the abundant production of CD4-induced (CD4i) antibodies (Abs), these Abs are not protective due to steric restrictions following gp120 binding to CD4 on target cells. 28366604 2017
Entrez Id: 124401
Gene Symbol: ANKS3
ANKS3
0.300 GermlineCausalMutation disease ORPHANET ANKS3 is mutated in a family with autosomal recessive laterality defect. 27417436 2016
Entrez Id: 203286
Gene Symbol: ANKS6
ANKS6
0.300 Biomarker disease CTD_human ANKS6 is a central component of a nephronophthisis module linking NEK8 to INVS and NPHP3. 23793029 2013
Entrez Id: 27130
Gene Symbol: INVS
INVS
0.030 GeneticVariation disease BEFREE Association of INVS (NPHP2) mutation in an adolescent exhibiting nephronophthisis (NPH) and complete situs inversus. 18218308 2008
Entrez Id: 85363
Gene Symbol: TRIM5
TRIM5
0.010 AlteredExpression disease BEFREE Associations were explored between the expression of particular TRIM5 alleles and both the permissiveness of cells to SIV infection in vitro and clinical sequelae of SIV infection in vivo. 20107597 2010
Entrez Id: 6899
Gene Symbol: TBX1
TBX1
0.020 Biomarker disease BEFREE Background Reduced ventricular function and decreased exercise capacity are widespread in adults with complete transposition of the great arteries after atrial switch ( TGA -Mustard/Senning) and congenitally corrected TGA (cc TGA ). 30371262 2018
Entrez Id: 3821
Gene Symbol: KLRC1
KLRC1
0.010 Biomarker disease BEFREE Because nonhuman primates (NHP) play a crucial role in modeling HIV (SIV) infections, it is crucial to be able to assess and characterize the NKG2 family in NHP. 31167916 2019
Entrez Id: 168507
Gene Symbol: PKD1L1
PKD1L1
0.400 GermlineCausalMutation disease ORPHANET Bi-allelic Mutations in PKD1L1 Are Associated with Laterality Defects in Humans. 27616478 2016
Entrez Id: 168507
Gene Symbol: PKD1L1
PKD1L1
0.400 CausalMutation disease CLINVAR Bi-allelic Mutations in PKD1L1 Are Associated with Laterality Defects in Humans. 27616478 2016
Entrez Id: 27031
Gene Symbol: NPHP3
NPHP3
0.120 CausalMutation disease CLINVAR Characterizing the morbid genome of ciliopathies. 27894351 2016
Entrez Id: 100532724
Gene Symbol: NPHP3-ACAD11
NPHP3-ACAD11
0.100 CausalMutation disease CLINVAR Characterizing the morbid genome of ciliopathies. 27894351 2016
Entrez Id: 3574
Gene Symbol: IL7
IL7
0.020 Biomarker disease BEFREE Collagen deposition restricted T cell access to the survival factor IL-7 on the fibroblastic reticular cell (FRC) network, resulting in apoptosis and depletion of T cells, which, in turn, removed a major source of lymphotoxin-β, a survival factor for FRCs during SIV infection in rhesus macaques. 21393864 2011
Entrez Id: 112935892
Gene Symbol: LINC02605
LINC02605
0.010 Biomarker disease BEFREE Collagen deposition restricted T cell access to the survival factor IL-7 on the fibroblastic reticular cell (FRC) network, resulting in apoptosis and depletion of T cells, which, in turn, removed a major source of lymphotoxin-β, a survival factor for FRCs during SIV infection in rhesus macaques. 21393864 2011
Entrez Id: 4050
Gene Symbol: LTB
LTB
0.010 Biomarker disease BEFREE Collagen deposition restricted T cell access to the survival factor IL-7 on the fibroblastic reticular cell (FRC) network, resulting in apoptosis and depletion of T cells, which, in turn, removed a major source of lymphotoxin-β, a survival factor for FRCs during SIV infection in rhesus macaques. 21393864 2011
Entrez Id: 3627
Gene Symbol: CXCL10
CXCL10
0.020 Biomarker disease BEFREE Concentrations of biomarkers of acute and chronic inflammation such as soluble CD14, CXCL10, IL-6 and TNF-α are known to be elevated following SIV infection of young adult macaques of several species, but concentrations of these biomarkers did not shift after SIV infection in aged RM-Ch and remained similar to mock-infected macaques. 29391069 2018
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.050 Biomarker disease BEFREE Concentrations of biomarkers of acute and chronic inflammation such as soluble CD14, CXCL10, IL-6 and TNF-α are known to be elevated following SIV infection of young adult macaques of several species, but concentrations of these biomarkers did not shift after SIV infection in aged RM-Ch and remained similar to mock-infected macaques. 29391069 2018
Entrez Id: 3439
Gene Symbol: IFNA1
IFNA1
0.030 Biomarker disease BEFREE Correction: Stage-specific IFN-induced and IFN gene expression reveal convergence of type I and type II IFN and highlight their role in both acute and chronic stage of pathogenic SIV infection. 29474456 2018
Entrez Id: 3447
Gene Symbol: IFNA13
IFNA13
0.030 Biomarker disease BEFREE Correction: Stage-specific IFN-induced and IFN gene expression reveal convergence of type I and type II IFN and highlight their role in both acute and chronic stage of pathogenic SIV infection. 29474456 2018
Entrez Id: 115948
Gene Symbol: CCDC151
CCDC151
0.020 GeneticVariation disease BEFREE Correction: Whole-exome sequencing identifies a novel CCDC151 mutation, c.325GT (p.E109X), in a patient with primary ciliary dyskinesia and situs inversus. 31178588 2019
Entrez Id: 8174
Gene Symbol: MADCAM1
MADCAM1
0.010 Biomarker disease BEFREE Data from nonhuman primate models infected with simian immunodeficiency virus (SIV) have suggested that blockade of the α<sub>4</sub>β<sub>7</sub>/MAdCAM-1 interaction may be effective at preventing SIV infection and may have beneficial effects in animals with established viral infection. 31488581 2019
Entrez Id: 190
Gene Symbol: NR0B1
NR0B1
0.010 Biomarker disease BEFREE Dextran sulfate sodium (DSS-exposure) is an established animal model for experimental colitis that was recently shown to recapitulate the link between GI-tract damage and pathogenic features of SIV infection. 28687795 2017