Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 5395
Gene Symbol: PMS2
PMS2
0.300 Biomarker group CTD_human Novel PMS2 pseudogenes can conceal recessive mutations causing a distinctive childhood cancer syndrome. 15077197 2004
Entrez Id: 65998
Gene Symbol: C11orf95
C11orf95
0.100 Biomarker group HPO
Entrez Id: 5970
Gene Symbol: RELA
RELA
0.100 Biomarker group HPO
Entrez Id: 10046
Gene Symbol: MAMLD1
MAMLD1
0.010 Biomarker group BEFREE Ependymoma with YAP1-MAMLD1 fusion is a rare, recently described supratentorial neoplasm of childhood, with few cases published so far. 30246434 2019
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.010 GeneticVariation group BEFREE Whereas PA of posterior fossa in children have a high prevalence of BRAF duplication and fusion, primary molecularm abnormalities in supratentorial tumors of adults are more diverse and also include BRAF V600E point mutation. 25066317 2016
Entrez Id: 7431
Gene Symbol: VIM
VIM
0.010 Biomarker group BEFREE All 5 cases had supratentorial tumors that immunohistochemical analysis revealed to be robustly positive for epithelial membrane antigen, vimentin, p53, and PDGFRα (platelet-derived growth factor receptor, alpha polypeptide) but only focally positive for glial fibrillary acidic protein. 24457079 2014
Entrez Id: 2670
Gene Symbol: GFAP
GFAP
0.010 Biomarker group BEFREE All 5 cases had supratentorial tumors that immunohistochemical analysis revealed to be robustly positive for epithelial membrane antigen, vimentin, p53, and PDGFRα (platelet-derived growth factor receptor, alpha polypeptide) but only focally positive for glial fibrillary acidic protein. 24457079 2014
Entrez Id: 5156
Gene Symbol: PDGFRA
PDGFRA
0.010 Biomarker group BEFREE All 5 cases had supratentorial tumors that immunohistochemical analysis revealed to be robustly positive for epithelial membrane antigen, vimentin, p53, and PDGFRα (platelet-derived growth factor receptor, alpha polypeptide) but only focally positive for glial fibrillary acidic protein. 24457079 2014
Entrez Id: 3417
Gene Symbol: IDH1
IDH1
0.010 Biomarker group BEFREE Additional variables that were present in all six patients include the presence of an oligodendroglial component within the supratentorial tumor, mutated IDH1, and the supratentorial tumor contacting the ventricular margin.All six patients were males. 22311105 2012
Entrez Id: 1030
Gene Symbol: CDKN2B
CDKN2B
0.010 AlteredExpression group BEFREE Only ∼50% of supratentorial tumors were positive for CDKN2B expression by immunohistochemistry (IHC), while ∼75% of infratentorial tumors were positive for CDKN2B expression (P = 0.03). 21138945 2011
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.010 Biomarker group BEFREE Loss of CDKN2A/CDKN2B in 4 of 38 (10%) samples by oligo array CGH was confirmed by fluorescent in situ hybridization on tissue microarrays and was restricted to supratentorial tumors. 21138945 2011
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.010 GeneticVariation group BEFREE Analysis of the TP53 gene showed 2 mutations in the medulloblastomas and no mutations in the supratentorial tumors. 9242214 1997