Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 6556
Gene Symbol: SLC11A1
SLC11A1
0.330 GeneticVariation disease BEFREE We genotyped four polymorphisms in the SLC11A1 gene, previously associated with susceptibility to BU. 27097163 2016
Entrez Id: 6556
Gene Symbol: SLC11A1
SLC11A1
0.330 GeneticVariation disease LHGDN We conclude that a genetic polymorphism in the SLC11A1 gene plays a role in susceptibility to develop Buruli ulcer, with an estimated 13% population attributable risk. 16395392 2006
Entrez Id: 6556
Gene Symbol: SLC11A1
SLC11A1
0.330 GeneticVariation disease BEFREE We conclude that a genetic polymorphism in the SLC11A1 gene plays a role in susceptibility to develop Buruli ulcer, with an estimated 13% population attributable risk. 16395392 2006
Entrez Id: 6556
Gene Symbol: SLC11A1
SLC11A1
0.330 Biomarker disease BEFREE We review possible genetic host susceptibility factors for BU that are relevant in other mycobacterial diseases: natural resistance-associated macrophage protein-1 (NRAMP-1), HLA-DR, vitamin D3 receptor, mannose binding protein, interferon-gamma (IFN-gamma) receptor, tumour necrosis factor alpha (TNF-alpha), interleukin (IL)-1 alpha, 1 beta and their receptor antagonists; and IL-12. 11469950 2001
Entrez Id: 6556
Gene Symbol: SLC11A1
SLC11A1
0.330 Biomarker disease CTD_human
Entrez Id: 3458
Gene Symbol: IFNG
IFNG
0.030 Biomarker disease BEFREE The major response to PKS antigen stimulation was IFN-γ and the strongest responses were observed in healthy contacts of patients living in areas endemic for Buruli ulcer. 30090691 2018
Entrez Id: 3458
Gene Symbol: IFNG
IFNG
0.030 Biomarker disease BEFREE Proportions of cytokine double-positive IFNγ+TNFα+, TNFα+CD40L+, IFNγ+CD40L+ (p = 0.014, p = 0.010, p = 0.002, respectively) and triple positive IFNγ+TNFα+CD40L+ (p = 0.010) producing CD4+ T cell subsets were increased in BUD patients. 28241036 2017
Entrez Id: 3458
Gene Symbol: IFNG
IFNG
0.030 Biomarker disease BEFREE We review possible genetic host susceptibility factors for BU that are relevant in other mycobacterial diseases: natural resistance-associated macrophage protein-1 (NRAMP-1), HLA-DR, vitamin D3 receptor, mannose binding protein, interferon-gamma (IFN-gamma) receptor, tumour necrosis factor alpha (TNF-alpha), interleukin (IL)-1 alpha, 1 beta and their receptor antagonists; and IL-12. 11469950 2001
Entrez Id: 29927
Gene Symbol: SEC61A1
SEC61A1
0.010 Biomarker disease BEFREE Sec61 blockade by mycolactone: A central mechanism in Buruli ulcer disease. 30055020 2018
Entrez Id: 369
Gene Symbol: ARAF
ARAF
0.010 Biomarker disease BEFREE A vaccine for this disease is not available but <i>M. ulcerans</i> possesses a giant plasmid pMUM001 that harbours the polyketide synthase (PKS) genes encoding a multi-enzyme complex needed for the production of its unique lipid toxin called mycolactone, which is central to the pathogenesis of Buruli ulcer. 30090691 2018
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.010 Biomarker disease BEFREE Proportions of cytokine double-positive IFNγ+TNFα+, TNFα+CD40L+, IFNγ+CD40L+ (p = 0.014, p = 0.010, p = 0.002, respectively) and triple positive IFNγ+TNFα+CD40L+ (p = 0.010) producing CD4+ T cell subsets were increased in BUD patients. 28241036 2017
Entrez Id: 105371045
Gene Symbol: PERCC1
PERCC1
0.010 Biomarker disease BEFREE We report the results of experiments using ICR mice that give credence to our hypothesis that Acanthamoeba species may play a role in BU transmission. 28329001 2017
Entrez Id: 959
Gene Symbol: CD40LG
CD40LG
0.010 Biomarker disease BEFREE Proportions of cytokine double-positive IFNγ+TNFα+, TNFα+CD40L+, IFNγ+CD40L+ (p = 0.014, p = 0.010, p = 0.002, respectively) and triple positive IFNγ+TNFα+CD40L+ (p = 0.010) producing CD4+ T cell subsets were increased in BUD patients. 28241036 2017
Entrez Id: 10018
Gene Symbol: BCL2L11
BCL2L11
0.010 Biomarker disease BEFREE As predicted by the model, M. ulcerans infected Bim knockout mice did not develop necrotic BU lesions with large clusters of extracellular bacteria, but were able to contain the mycobacterial multiplication. 28294596 2017
Entrez Id: 5071
Gene Symbol: PRKN
PRKN
0.010 GeneticVariation disease BEFREE The rs1333955 SNP in PARK2 was significantly associated with increased susceptibility to BU [odds ratio (OR), 1.43; P = 0.05]. 27128681 2016
Entrez Id: 30813
Gene Symbol: VSX1
VSX1
0.010 Biomarker disease BEFREE To assess the potential for a serodiagnostic test, we measured the humoral immune response of BU patients to M. ulcerans antigens and compared this response with delayed-type hypersensitivity responses to both Burulin and PPD. 10756149 2000
Entrez Id: 3242
Gene Symbol: HPD
HPD
0.010 Biomarker disease BEFREE To assess the potential for a serodiagnostic test, we measured the humoral immune response of BU patients to M. ulcerans antigens and compared this response with delayed-type hypersensitivity responses to both Burulin and PPD. 10756149 2000
Entrez Id: 27161
Gene Symbol: AGO2
AGO2
0.010 Biomarker disease BEFREE To assess the potential for a serodiagnostic test, we measured the humoral immune response of BU patients to M. ulcerans antigens and compared this response with delayed-type hypersensitivity responses to both Burulin and PPD. 10756149 2000
Entrez Id: 8838
Gene Symbol: CCN6
CCN6
0.010 Biomarker disease BEFREE To assess the potential for a serodiagnostic test, we measured the humoral immune response of BU patients to M. ulcerans antigens and compared this response with delayed-type hypersensitivity responses to both Burulin and PPD. 10756149 2000